| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39550 |
|---|
| Symbol | leuS |
|---|
| ID | 8389276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 4279108 |
|---|
| End bp | 4281957 |
|---|
| Gene Length | 2850 bp |
|---|
| Protein Length | 949 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977965 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_003135724 |
|---|
| Protein GI | 257057892 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.990256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.390992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG GTACCGAAGC GGTTCCGGCA CACCGTTACA CGGCGGAGCT GGCCGGGCGG
ATCGAACGAC GTTGGCAGGA GTACTGGGAA GCCAACGGCA CCTATCACGC TCCGAACCCG
GTGGGCTCGC TCGCCGACAA GGATTCCGAG GTGCCGTCCG ACAAGTTGTT CGTGCAGGAC
ATGTTCCCGT ACCCGTCGGG CGCGGGCCTG CACGTCGGGC ATCCGCTGGG CTTCATCGGT
ACCGACGTGT TCGCTCGGTA CAACCGCATG ATCGGGCGCA ACGTGCTCCA CACGATGGGG
TTCGACGCGT TCGGTCTGCC GGCCGAGCAG TACGCGGTGC AGACGGGCAC GCACCCGCGC
ACCACCACCG AGGCGAACAT CAAGCGGTAT CTGGCCCAGA TCCGCAGGTT GGGTCTGGGG
CACGACGAAC GGCGGCGGAT CGCGACCACC GACGTCGACT ACTACCGGTG GACGCAGTGG
ATCTTCCTGC AGATCTTCAA CGCCTACTAC GACACGGAAC AGAACAAGGC GCGGCCGATC
TCGGAGCTGG AGAAGGCCTA CGCCGAGGGA AGGCGGGCCA CGCCGGACGG GCGGCCGTGG
CACGAGCTGT CGCGTAAGGA ACAGCGGGAG ATCATCGACT CGCACCGGTT GGTGTACCTG
TCCGAGGCGC CGGTGAACTG GGCTCCCGGC TTGGGCACGG TGGTGGCGAA CGAGGAGGTC
ACCGCCGAGG GCCGTACCGA ACGGGGCAAC TTCCCCGTGT TCCGGCGGAA CCTGCGCCAG
TGGATGATGC GCATCACGGC GTACGCCGAT CGCCTGCTCG ACGACCTGGA CCGGCTGGAC
TGGCCGGAGA AGATCAAGAC GATGCAGCGG AACTGGATCG GCCGGTCGCG TGGTGCGAAC
GTCCGGTTCC GCTCGGGTGA GCACACCATC GAGGTGTTCA CCACGCGTCC CGACACGCTG
TTCGGCGCCA CGTACATGGT GTTGGCGCCG GAGCATCCGT TGGTGGACGA GTTGGTGCCC
GCCGAGTGGT CCGAGGGGGT CGACGAGCGG TGGACCGGCG GTGCCGCGAC CCCGGGTGAG
GCCGTGGCCT CGTATCGGCG GGAGACGTCG CGCAAGTCCG AGCTCGACCG CCAGGAGAGC
AAGGAGAAGA CGGGGGTGTT CACCGGGGCG TACGCCACGA ACCCGGTGAA CGGTAAGCGG
ATCCCCGTGT TCATCGCCGA CTACGTGCTG ATGGGCTACG GCACCGGCGC GATCATGGCC
GTGCCCGGCG AGGATCAGCG CGACTGGGAT TTCGCCACGA AGTTCGGTCT GGACATCCTG
CGCACGGTGC AGCCGGGCGA GGACTTCGAC GGCGAGGCGT TCGACGGCGA CGGCGCGCAC
ATCAACTCGG CCAACGACGA GATCGATCTC AACGGCCTGA ACATCGAGGA CGCCAAGAAC
AAGATCATCG AGTGGTTGGA GCACAAGGGC CACGGCGAGG GCACGGTGCA GTACAAGCTG
CGCGACTGGC TGTTCGCCCG CCAGCGGTAC TGGGGTGAGC CGTTCCCCAT CGTCTACGAC
TCCGACGGCA TGCCGATCGC GCTGCCGGAG GATCAGTTGC CGGTCGTGCT GCCCGAGGTG
GACGACTACT CGCCGAAGAC GTTCGACCCG GAGGACGCCG ACGCCGAGCC CGAGCCGCCG
CTGGCGCGGG CCACCGACTG GGTCGAGGTG ACGCTGGACC TGGGTGACGG GCCGAAGAAG
TATTGGCGCG ACACCAACGT GATGCCGCAG TGGGCGGGTT CGTGCTGGTA CCAGCTGCGT
TACATCGACC CGGACAACGA CGAGCGGTTC GTCGACCCGG TCAACGAGCG TTACTGGATG
GGGCCGCGTC CCGAGCTGCA CGGTGAGAAC GACCCGGGTG GTCTGGACCT GTACGTGGGC
GGGGTGGAGC ACGGCGTGCT GCACCTGCTG TACTCGCGGT TCTGGCACAA GGTGCTCTAC
GACCTGGGCT ACGTCTCGTC GGAGGAGCCG TACCGCAGGC TGTACAACCA GGGCTACATC
CAGGCCTACG CCTACACCGA CTCCCGCGGT GTGTACGTGC CCGCCGAGGA GGTGGAAGAA
CGCGACGGCA AGTTCTTCTA CAAGGGCGAG GAGGTCAAGC AGGAGTACGG CAAGATGGGC
AAGAGCCTGA AGAACGTCGT CACTCCTGAC GAGATCGCCG AGAACTACGG CGCGGACACG
TTCCGGTTCT ACGAGATGTC GATGGGACCG CTGGACGTGT CCAGGCCGTG GGCGACGAAG
GACGTGGTGG GCGCCCACCG GTTCCTGCAG CGGCTGTGGC GGCTGGTGGT GAACGAGAAC
ACCGGCGAGC TGCGGGTGGC CGACACGGAG TTGTCCGAGG AGGACCTGCG CCAGTTGCAC
CGGACGATCG CCGGGGTGCG GGAGGACTAC GCGAACCTAC GGTTCAACAC GGCGGGCGCG
AAGCTCATCG AGCTGAACAA CTACGTGACG AAGACCTACG GTTCGGCGAA GGCGACGCCG
CGTGGCCTGG CGGAGCCGTT GGTGTTGATG CTGGCTCCGA TGTGTCCGCA CATCGCCGAG
GAGCTGTGGC ACCGGCTGGG GCACTCGGAA TCGCTGGTGC ACGGCCCGTT CCCGACGGTG
GACGAGCGGT ACCTGGTGGA CGAGACGGTC GAGTACCCGA TCCAGGTCAA CGGCAAGGTG
CGGTCGAGGA TGACGGTGCC CGCGGACGCC GATCAGGAGG AGCTGAAGAA GGCGGCGCTG
GCCGACGAGA AGATCGTGGC GGCGTTGGAG GGCGCGGAGC CTCGCAAGGT CATCGTGGTG
CCGGGTCGGC TGGTGAACGT GGTGAAGTGA
|
|---|
| Protein sequence | MTDGTEAVPA HRYTAELAGR IERRWQEYWE ANGTYHAPNP VGSLADKDSE VPSDKLFVQD
MFPYPSGAGL HVGHPLGFIG TDVFARYNRM IGRNVLHTMG FDAFGLPAEQ YAVQTGTHPR
TTTEANIKRY LAQIRRLGLG HDERRRIATT DVDYYRWTQW IFLQIFNAYY DTEQNKARPI
SELEKAYAEG RRATPDGRPW HELSRKEQRE IIDSHRLVYL SEAPVNWAPG LGTVVANEEV
TAEGRTERGN FPVFRRNLRQ WMMRITAYAD RLLDDLDRLD WPEKIKTMQR NWIGRSRGAN
VRFRSGEHTI EVFTTRPDTL FGATYMVLAP EHPLVDELVP AEWSEGVDER WTGGAATPGE
AVASYRRETS RKSELDRQES KEKTGVFTGA YATNPVNGKR IPVFIADYVL MGYGTGAIMA
VPGEDQRDWD FATKFGLDIL RTVQPGEDFD GEAFDGDGAH INSANDEIDL NGLNIEDAKN
KIIEWLEHKG HGEGTVQYKL RDWLFARQRY WGEPFPIVYD SDGMPIALPE DQLPVVLPEV
DDYSPKTFDP EDADAEPEPP LARATDWVEV TLDLGDGPKK YWRDTNVMPQ WAGSCWYQLR
YIDPDNDERF VDPVNERYWM GPRPELHGEN DPGGLDLYVG GVEHGVLHLL YSRFWHKVLY
DLGYVSSEEP YRRLYNQGYI QAYAYTDSRG VYVPAEEVEE RDGKFFYKGE EVKQEYGKMG
KSLKNVVTPD EIAENYGADT FRFYEMSMGP LDVSRPWATK DVVGAHRFLQ RLWRLVVNEN
TGELRVADTE LSEEDLRQLH RTIAGVREDY ANLRFNTAGA KLIELNNYVT KTYGSAKATP
RGLAEPLVLM LAPMCPHIAE ELWHRLGHSE SLVHGPFPTV DERYLVDETV EYPIQVNGKV
RSRMTVPADA DQEELKKAAL ADEKIVAALE GAEPRKVIVV PGRLVNVVK
|
|---|
| |