Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39520 |
Symbol | |
ID | 8389273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4275601 |
End bp | 4276260 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977962 |
Product | protein of unknown function (DUF1707) |
Protein accession | YP_003135721 |
Protein GI | 257057889 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.733085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.653702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG AACAGAGCAA CGAGGAACAG CTCTCGGCGG AGCAGCGCAG ACTTCGGGAG CTCCGGGTCT CCGACCAGGA GCGAGAGCAC GTCGTCGAAT TGCTGAAAAC CGCCACCGGG CGGGGCCTGA TCGACCTCGA CGAGTTCAGT GAACGGGCCG ACACCGCCTA CGCCGCGCGC ACCAGAGGCG AACTGAACAA GGTCCTCATC GATCTGCCGG GCCTGGTGCA CCCCGAGGCC GCCGTCATCG GAGTCGGCAA TCGGACCGTC GCGGCCGGTG TGACCGTGCC GATCCCCGTG CCGGGCGAAC AACTCGTCCT CCGCGCCCAC GGTTCGAACC TGGTGCGCAA GGGGCAGTGG ACGGTGCCGT CGGCGATCCT GGTGCGCAAC CGTTACGGCG ACGCCCGCCT CGATTTCAGC GAGGCGAACA TGACCAGTGA CGTGGTGCAC ATCGAGCTCG ACGTGAAATG GGGGTCCGTC CACCTCATCA TTCCCGAGCA CGCGTCGCTG GACCTCAACG CGTTGAACGA CGTGAAGTGG TCGAGCGTGA ACGACAAGAC CCGAGGGGGG ACGGGCGCTC CCCGGTTCGT CGTCACCGGC CGCCTCACAG GCAGCTCCCT GAACGTCCGG CACCCACGCA GGGGCCTGTT CTCGTTCTAG
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Protein sequence | MSEEQSNEEQ LSAEQRRLRE LRVSDQEREH VVELLKTATG RGLIDLDEFS ERADTAYAAR TRGELNKVLI DLPGLVHPEA AVIGVGNRTV AAGVTVPIPV PGEQLVLRAH GSNLVRKGQW TVPSAILVRN RYGDARLDFS EANMTSDVVH IELDVKWGSV HLIIPEHASL DLNALNDVKW SSVNDKTRGG TGAPRFVVTG RLTGSSLNVR HPRRGLFSF
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