| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39460 |
|---|
| Symbol | |
|---|
| ID | 8389267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 4268916 |
|---|
| End bp | 4269713 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977956 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135715 |
|---|
| Protein GI | 257057883 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0372485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.229524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGAAC AGCAGGTGAG CATGTCGACG GCAACCATGC TCACTCTCAT CCGCCGCACC
GGAGCCGAGC CACACACCGT ATTGGCGACC ACCCCGGTGT GGGAGGACGA ACGCGCGCGG
AAACAGTCCG AGGAACGGGC CAACACCGAG TTGGCCCGTC TCGGGCTGCA TGACGGACAC
AACGTGCACC CGGATCTGCT GGCCACCGTG AACGCCATCG CGAATCCCGC GTTGGAGTAC
TACGCGTGGG TCAACGGTAG GTACGAGGAC CGGGCCTTGA ACTACACGGT GCTGGCCGGG
TCCGGAGCCG GTGAGGCATT CGTACTGGTC CGCAACTCCG ATTCGGACAG TGTGGCTCTC
GGGTGTGTCC ACCCGAACGA ATTGATGGAG AACTTCATCG CCCAGCTGCC GCCGCTGAAT
CCCGGCCGTG GTCAGCCGAT GCAGGTGCCG AAGAGCGAGA TGTCGGGCGG TGCGCCGCGA
CGGGACTTCG ACGGCGAGAA CTTCTCGGTG ATGAGCAACG GACGGCGGAG CGCCACGGCG
ACCGAGGTGG CGGAGATGCG CCGCATCCTC CAACTCCCCC GGTTGGGCGG AGGAAGCCTG
TACGTGGCGG CGCGGAGTCG TAGCGGCAGG CGGGAACGCG CCGAACGTCC GGTGAACTAC
ATCGACACCC CCGAGGGGCG TTGGCTGACC GAGGAGGTGC CGGGCAGCGG GGAACCGATG
ATCGCCTTCC ACCCGGCGTC ACCACAATTA CTCGTCCAGC GGTTACGGAA CGCACAAAGC
CGACTGCCCA TCACCTGA
|
|---|
| Protein sequence | MLEQQVSMST ATMLTLIRRT GAEPHTVLAT TPVWEDERAR KQSEERANTE LARLGLHDGH
NVHPDLLATV NAIANPALEY YAWVNGRYED RALNYTVLAG SGAGEAFVLV RNSDSDSVAL
GCVHPNELME NFIAQLPPLN PGRGQPMQVP KSEMSGGAPR RDFDGENFSV MSNGRRSATA
TEVAEMRRIL QLPRLGGGSL YVAARSRSGR RERAERPVNY IDTPEGRWLT EEVPGSGEPM
IAFHPASPQL LVQRLRNAQS RLPIT
|
|---|
| |