| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39350 |
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| Symbol | |
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| ID | 8389256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4260125 |
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| End bp | 4261732 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977945 |
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| Product | predicted integral membrane protein |
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| Protein accession | YP_003135704 |
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| Protein GI | 257057872 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5650] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.658608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAGCG ATAGTTATGG TTCGCAGCAG ACTTCGACGC CCGACACCGC GTCGCTGGAC
GCATCACAGC GGGTGATCCC GAGTTGGTCG GACCCGCTCG CGGAGGCGGT GACCCGCCCC
GTGGGCGGGC CGCTCGGTCG CCACGCGGCC GTGGGCCGGC ACTGGTTCTG GACTCCGCTG
CGCGTCTGTC TGCTGCTGGC GGTCCTCGGT CTCACGGCGG GCTGGTTCGG TAAGGCCGCG
TGCATCCAGC AGTACGTCAC CGAACAAGGT GACATCGAGC TCGACTGGCG ATCGGGCAGA
CAGTACGTGG CGATGTGCTA CTCCGACATC GTCCCGCTCT ACACCGCCGA GCGGCTCGAC
GAGGACGGCA CCTTCCCGTA CGCCACAAGC TGGGTGGAGA ACGAGGGCAC CGAGTACGAA
CAGGTGCGCT ACATGGAGTA CCCCGTGTTG AGCGGCCTGT TCCAGTGGGT CAACGCCAAA
CTCGCGCATG GCTGGGACGA CGCGGCCGAG TCGGGCTGGT TGCCGGGGGC ACTGCCCGTG
GTGGTGTATT TCAACATCAC GGCGTTCTTC CTGTCCGCGG CATGGTTGAT CACGGTCTGG
GCGGTGGCCA GAACCGCACG ACATCGGATC TGGGACGCGG CGCTCGTGGC CGTGTCACCG
CTCGTGGTCG TGCACGCGTT CACGAATTTC GACGCGCTCG CCACCGCCGC GGCCGCGACG
GGGCTGTTGG CCTGGGCCCG GAGGAAACCG GTCCTCGCGG GCGTGCTGTT GGGGGTCGGA
GCCGCGGCGA AGCTCTATCC ACTGTTCTTC CTCGGACCGC TGCTCGTGCT GTGTGTCCGT
GCGCAAAGGC TCAAGGTGTG GGCGCGTACC GCCGGCGCCG CGGCCACGAC GTGGGCCGCC
CTCAACCTGC CCTTCATGGT CTTCCTCCGT GAGGGATGGG CGGAATTCTT CAGGCTCAAC
ACCCAGCGGG ACATGGACCC CGACTCGCTG TACAACGTGA TCTCGTACTT CACGGGATGG
CAGGGCTTCG ACGGTCCGCT CGGGCCGGGG GAGTCGCCGG CGATCTTGAA CGCGGTCAGC
GGTGCCCTGT TCCTGGCGTT GTGCGGAGGT ATCGCCTACG TCGCGCTGTC GGCCCCACGG
CGACCACGAG TGGCGCAGCT GTGTTTCCTC GTCGTGGCGG CGTTCCTGTT GACCAACAAG
GTGTGGAGTC CGCAGTACTC GCTGTGGCTG GTACCGCTGG CCGTGCTGGC CATTCCGCGT
TGGCGGCTGC TGTTGGGCTG GATGGTGGTG GACGCGCTCG TATGGGCCCC GCGCATGTTC
TACTACCTCG GCGTGAGCAA CAAGGGCCTG CCCGAAGGCT GGTTCCTCGG CACGGTCGTC
GTGCGTGACG TCGTGGTGGT CCTGCTCTGC GTGTTGATCC TCCGGGAGAT CTACCGGCCG
GCACAGGATG CGGTACGGGT CCACGGTGTG GACGATCCCG TGGGTGGGGT TCTCGACGGC
GCCGAGGACC GCGTCGTCCT CCCCCGTCGT GGGCGGCGTG GTGGCGGCGA GCAACCCACC
TCGGCGGATC AGAGTCGCGC GCGCAGGAAC TCGATGTCGG TGGCCTGA
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| Protein sequence | MSSDSYGSQQ TSTPDTASLD ASQRVIPSWS DPLAEAVTRP VGGPLGRHAA VGRHWFWTPL
RVCLLLAVLG LTAGWFGKAA CIQQYVTEQG DIELDWRSGR QYVAMCYSDI VPLYTAERLD
EDGTFPYATS WVENEGTEYE QVRYMEYPVL SGLFQWVNAK LAHGWDDAAE SGWLPGALPV
VVYFNITAFF LSAAWLITVW AVARTARHRI WDAALVAVSP LVVVHAFTNF DALATAAAAT
GLLAWARRKP VLAGVLLGVG AAAKLYPLFF LGPLLVLCVR AQRLKVWART AGAAATTWAA
LNLPFMVFLR EGWAEFFRLN TQRDMDPDSL YNVISYFTGW QGFDGPLGPG ESPAILNAVS
GALFLALCGG IAYVALSAPR RPRVAQLCFL VVAAFLLTNK VWSPQYSLWL VPLAVLAIPR
WRLLLGWMVV DALVWAPRMF YYLGVSNKGL PEGWFLGTVV VRDVVVVLLC VLILREIYRP
AQDAVRVHGV DDPVGGVLDG AEDRVVLPRR GRRGGGEQPT SADQSRARRN SMSVA
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