| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39340 |
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| Symbol | |
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| ID | 8389255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4257624 |
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| End bp | 4260068 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977944 |
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| Product | membrane carboxypeptidase (penicillin-binding protein) |
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| Protein accession | YP_003135703 |
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| Protein GI | 257057871 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.794703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCCG CGGCGCTGCC GGGTGAGGCT GACCAGCGCG AACCCGAGCT GATCACCCAC
CGTGCCTACA ACGGTACGAC CGACTCCGGG TTCGACGGCG ACGGTCACGA CCGTTTCGAC
GAGCGTCCCG AACGGAACGG GAACCGGCTG CACGAAGCCG GTCTCCACGA CGCGAACGAC
GACCCCACCC CGAACGGTGG GAAGAACGGA AAGGGCGGAA AGGGCGGAAA GGGCAAGGCG
CTCACCCCGG CACAGCGCCG GAAACGCCGC TGGAAGATCA TCCGACGGAG CCTCTACGCC
TTCTTCGGTC TCTTCTTCGT ACTCCCGGCC GCGGCCTTCG CCATCACGTA CTTCCTCGTC
GACGTCCCGA CCCCCGAGGA AGTGGCCGAG CAACAGGCCA AGGTCGTGAC CTATCTCTAC
GCCGACGGCG AGACCGAGAT GGGACGCGAC ATCCCGGCCG GCGGCGACGG TAACCGTATC
CTGCTCAAAC CGCACGAGAT CACACCGGTG GTGAAGCACG CGGTCTACGC GGCCGAGGAC
TCCACGTTCG AGACCAACCC CGGTTTCGAC ATCACCGGCA TCCTGCGCGC CGTGTACAAC
CAGGCCACCG GCGGGGTCGG TGGTGGTTCC ACCATCACCC AGCAGTACAT CAAGGTGGCC
ACCGAAAACG ACGAGTACTC GGTCACCCGG AAATGGACCG AGATCGTCAA GGCCTTCAAG
ATGAGCAACG AGCAGAGCAA GGCCGAGATC ATCACCGCCT ACCTGAACAC GATCTACTTC
GGTCGAGGCG CGTACGGCAT CCAGACGGCG GCCCAGGCGT ACTTCGGTAA GGACGCCGCG
GATCTCGACG TCTCCGAGGC CGCGCTGCTC GCCGGGATGA TCCAGCAGCC CAGCCGGTCG
GAGAACCCCG AGGTCCGGGA GAAGCGCTGG AACTACGTGA TGGACCAGAT GGTCGCCAAC
AACTGGCTCA GCAAGGCCGA ACGGGAGGCG GCGAAACCAC CGGAGCTGAT CCCGCTCGAG
GAGGCCAAGC CCGACACCAT CAGCGGTCCC AAGAAGTACA TCCAGCAGCG GGCCATGCAG
GAGCTCGCCG AGAAGGGCTA TCCGGAGGAG AAGCTCCGCG CGGGCGGCTA CCGGATCCAC
CTGACCATCG ACCAGGAGGC ACAGGAGGCG GCCGAACGTG CCGTCGAGGA GGTCATGCAG
GGCGAGCCGG GCGAGCTGAA AGAGGCGCTG GTGGCCGTCG ACCCGAAGAC CGGCGGGGTA
CTGGCCTACT ACGGCGGCCC CTACGAGGCG GACGGCAACC AGTACGACTG GGCCTCCGCG
CAACGTAACC CGGGCTCGTC GTTCAAGCCG TTCGACCTGG TGGCGTTGCT GCGGCATGGC
AAAGGCCTCG GCGAGATCTA CGACGGCAGT TCCCCGAGGA CGTTCGGGGG CCGCGAGGTA
CGCAACTCCG AGAACGCCCA GTGCAACCCG TGTACCGTCG CCGAGGCGAT GCGGCGGTCC
ATCAACACGG TGTTCTTCGA CATCGTCGTC AACGAGGTGG GCCCGAAGGC GGTCGCCGAC
GCGGCCTCGG ACGCCGGCAT CCCCGAGAAG GGCGACGGTG TCAACCCCCT GCCCACGATG
GACAAACTCG ACGGGAACAT CTCCATCGGC GGTGGTGACA TCATGGTGTC GCCGTTGCAC
ATGGCCTCCG CGTACGCCAC CTTCGCCGCC GACGGCATCC GGCGCGAACC CCACTTCGTC
GCCAAACTGA CCACCCCGGA CGGCGAGGTG GTGTTCGACG AGACGTCCGA GGTGGCCACG
GAGGGTGAAC CCGCCTTCTC CGAGGACCCC GAGGAGAGCA AGCGGATCGC GGGCAACGTC
ACCAAGTCGT TGATCCCGGT CGTGCAGGAG GACTCGAGGC TGGCCTGTGC CGGAGGACGC
CCTTGTGCGG GCAAGACCGG CACGCACCAG TACGAGGACC AAAACGGCAT GCGGGTGGAC
GAGAACTCCG AGGCCTGGAT GGTGGGCTAC ACCCCACAGG TGTCGGCGGC CGTCTGGGTG
GGAAGCGGTG CGCACAAGCC CATCCGGAAC TCGCAGAACG CCCCCATCTA CGGCAGCGGG
CTGCCCGGTC AGATCTGGAA GACCTTCATG GACGCCTACC TCGAAGGCAA ACCGGTGGAG
CAGTTCGAGG AGGTCGAACC GATCGGCAGG GTCGAACCGC CACCCCCGCC GCCACAGGAC
GACGCGTCGC AGGTCGAGAC GTCCGAGGCC CCCGAGGAGA GCGAGACGAC GGAACCCGAG
CCGACCGACC CGTCGACGCC CCCGGAGGAC GAGGACCCGG ACGTCACGGC GCCGGAGCTG
CCGACCAATC CGGGTCCGGA ACCCCCCGGC AACGGCGGCG GGGACGACGA GAACCCGAGA
GAGCCGGGAT GGCCGTTCGA CCGGCAGGAG AGCAACACGT CCTGA
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| Protein sequence | MAAAALPGEA DQREPELITH RAYNGTTDSG FDGDGHDRFD ERPERNGNRL HEAGLHDAND
DPTPNGGKNG KGGKGGKGKA LTPAQRRKRR WKIIRRSLYA FFGLFFVLPA AAFAITYFLV
DVPTPEEVAE QQAKVVTYLY ADGETEMGRD IPAGGDGNRI LLKPHEITPV VKHAVYAAED
STFETNPGFD ITGILRAVYN QATGGVGGGS TITQQYIKVA TENDEYSVTR KWTEIVKAFK
MSNEQSKAEI ITAYLNTIYF GRGAYGIQTA AQAYFGKDAA DLDVSEAALL AGMIQQPSRS
ENPEVREKRW NYVMDQMVAN NWLSKAEREA AKPPELIPLE EAKPDTISGP KKYIQQRAMQ
ELAEKGYPEE KLRAGGYRIH LTIDQEAQEA AERAVEEVMQ GEPGELKEAL VAVDPKTGGV
LAYYGGPYEA DGNQYDWASA QRNPGSSFKP FDLVALLRHG KGLGEIYDGS SPRTFGGREV
RNSENAQCNP CTVAEAMRRS INTVFFDIVV NEVGPKAVAD AASDAGIPEK GDGVNPLPTM
DKLDGNISIG GGDIMVSPLH MASAYATFAA DGIRREPHFV AKLTTPDGEV VFDETSEVAT
EGEPAFSEDP EESKRIAGNV TKSLIPVVQE DSRLACAGGR PCAGKTGTHQ YEDQNGMRVD
ENSEAWMVGY TPQVSAAVWV GSGAHKPIRN SQNAPIYGSG LPGQIWKTFM DAYLEGKPVE
QFEEVEPIGR VEPPPPPPQD DASQVETSEA PEESETTEPE PTDPSTPPED EDPDVTAPEL
PTNPGPEPPG NGGGDDENPR EPGWPFDRQE SNTS
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