| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39260 |
|---|
| Symbol | |
|---|
| ID | 8389247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 4249424 |
|---|
| End bp | 4250023 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977936 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135695 |
|---|
| Protein GI | 257057863 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTCA CGCGTTCCCG CACGTCCGGT CTCGTCGGCG GCCTGGCCCT CGCCCTCGTC
ACGGGTCTCG GTGTCGCCGG GTGCGGTGCT TCCGAGACCG GACAGGGGGC GGACGAGACC
ACCTCCACCG ATCCCACCGC GGCGGCGGAA GCGCTGTCGC TGCACGACGG CTGGGTCAAG
GCCACCGAGG ACGACGAGGA CATGACGGCC GTCTTCGGGA CTCTCACCAA CGATTCCGAT
GCGGACGTCG TGGTGGAGGG CCTGAGCTCC CCCGTCGCGG GCTCGGGCGA GCTGCACGAG
ATGGCTGCGG GCGGTGACGG CCTGAACCCG ACGATGCGGG AGAAGGAGGG CGGGATCGTC
GTGCCCGCGG GCGGTGAGTA CACGCTCGAA CCCGGCGGGG ATCACTTCAT GTTGATGGAC
CTCAAGGAGC CTGTGCTCGC GGGTCAGGAC GTGACGATCG TCGTCACCGC GGACGACGGA
TCGACCGTCG AGTTCACCGT GGTGGGGCGG TCGTTCAGCG GTGCCCGGGA GAACTATGAG
GGCGACCACG GTGATCACGG CGGTGATCAC GAGGACGATC ACGAGGGTGA CCGTCGATGA
|
|---|
| Protein sequence | MRFTRSRTSG LVGGLALALV TGLGVAGCGA SETGQGADET TSTDPTAAAE ALSLHDGWVK
ATEDDEDMTA VFGTLTNDSD ADVVVEGLSS PVAGSGELHE MAAGGDGLNP TMREKEGGIV
VPAGGEYTLE PGGDHFMLMD LKEPVLAGQD VTIVVTADDG STVEFTVVGR SFSGARENYE
GDHGDHGGDH EDDHEGDRR
|
|---|
| |