Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39230 |
Symbol | |
ID | 8389244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4246818 |
End bp | 4247726 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977933 |
Product | ABC-type multidrug transport system, ATPase component |
Protein accession | YP_003135692 |
Protein GI | 257057860 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGG CAAGCCTACG TGGCGTGACC AAACGCTACG GCTCTCACAC AGCCGTGTCC GACGTGTCCT TCGAACTGCA CGCCAACCGC ATCCACGGTC TGCTGGGCCG TAACGGTGCG GGTAAGAGCA CCGTGATGCG CCTGCTCACC GGTCAGGACC TCCCGACCGA GGGCGACATC GAGGTGTTCG GTGGGAGCCC GTACGAGAAC GCGGACGTCC TGCGGCGGAT CTGCTTCATC AAGGAGTCGC AGAAGTATCC CGACGTCTTC AAGGCGCGGC ACGCGTTGAA GGCCGCGAGT CTGCTCTTTC CGAACTGGGA CGACGACTTC GCCGCCGAAC TCGTCGAGGA GTTCAAACTC CCCCTGAACC GGCAGGTCAG AAAGCTGTCG CGGGGCCAGT TGTCGATCGT CGGCGTGATC ATCGGATTGG CCGCGCGGGC ACCGCTGACC CTCTTCGACG AGCCGTATCT GGGACTGGAC GCCGTGGCGC GGCAGTTGTT CTACGACCGA CTGCTCGCCG ACTACGCCGA ACATCCACGC ACGATCGTGC TCTCGACCCA CCTGATCGAC GAGGTCAGCG ATCTCATCGA GCACGTCATC GTGATCGACT CCGGGCGCAT CCTCATGGAC GACAGCGCTG AGAACCTGCG GTCGCAGGCG ATCACGGTCA CGGGGCCGAA GCAGGCCGTG GAGGACTTCG CCGCGGGCTA CACCGAACTC CACCGTGAGG AACTCGGGGG ATTCCTCAGG GTCACGCTCA GCGGTGCGGC ACCGAGGCGC GACGTCCCGA ATCTGCGGGT GGAACCCGTT TCGCTGCAAC AACTCGTGGT GCGCACGACC CAACTGTCCG AGGCGGAGCG AGCGCTGGTC GGCGCTTCGA ACGGCACGAA CGGCGAGGAG GCCAGGTGA
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Protein sequence | MTVASLRGVT KRYGSHTAVS DVSFELHANR IHGLLGRNGA GKSTVMRLLT GQDLPTEGDI EVFGGSPYEN ADVLRRICFI KESQKYPDVF KARHALKAAS LLFPNWDDDF AAELVEEFKL PLNRQVRKLS RGQLSIVGVI IGLAARAPLT LFDEPYLGLD AVARQLFYDR LLADYAEHPR TIVLSTHLID EVSDLIEHVI VIDSGRILMD DSAENLRSQA ITVTGPKQAV EDFAAGYTEL HREELGGFLR VTLSGAAPRR DVPNLRVEPV SLQQLVVRTT QLSEAERALV GASNGTNGEE AR
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