| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39210 |
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| Symbol | |
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| ID | 8389242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4244793 |
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| End bp | 4246106 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644977931 |
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| Product | cytosine deaminase-like metal-dependent hydrolase |
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| Protein accession | YP_003135690 |
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| Protein GI | 257057858 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.769589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.540692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCC GCCTGCACTC CGCCGTCGTC CTTCCCGCCG ACCCCGACTG CTCCGTGCTC
CGGGACGCCG TGGTCGACAT CGACGCGCAC GGGCGGATCG CCTACTGCGG GCCCGCGGAG
ACCGCACCGA GCGGCCCCGA CGCCCCCGCC ACGACCCGGA AGCTGTCCGG GATCCTGCTT
CCCGGCCTGA TCAACGCCCA CGCCCACAGC CCGATGGTGC TACTGCGCGG CATGGGTGGT
GATCTTCCGT TGCTGCGTTG GCTGCGCGAG GTGATCTGGC CTACCGAGGC CAAGCTGCGC
CCCACGGACA TCAGCGTGGG GATGACGCTG GGTTCGGTGG AGATGCTGTG CCGAGGGGTC
ACCACGAGCG CCGAGATGTA CTTCCATCCC GAACGGATCG CCGCAAGCGT GCTCGCCACC
GGGGCCCGCG TCGTCCTCGG CGGTCCGATC ATCGACCTGC CCGGGATCGA CTGGCGGGTG
ATGCTGCGCG AGACCGACCG GTGGATCGAC GCCGACGGCC TGCGGTTCGG TACCGGTGAA
CGCATCGAGT TGTCGTACGC GCCGCATTCG GCCTACACGC TCCCCGTCGA GGCCCTGGAG
GCCGTCGCGG AGTCGGCCGC GGCACGTGGT GCGCTCGTGC AGATCCATGT CGCGGAGACC
GCCGACGAGG ACACCGCCCA GCGTGCCGAG CACGGGTCGG TGCCCGCGTT GTTGCGGAAG
ACGGGGCTGC TCGACGGCAG GCTGCTCGCC GCACACGCCG TGCATCTGTC CGATTCGGAC
ATCGACTTGT TCGCGGCGAA CGGTACCGGG GTGGCGCACT GTCCCGGGTC CAACGCCAAA
CTCGCCTCCG GTATCGCCCG GCTCACCGAC CTGCGGGCCG CGTCCGTCGC GGTCGGTCTC
GGCACCGACG GCCCGGCCAG CAACGACGAC CTCGACCTGT GGGAGGAGGT GCAGCTGTCG
GCCATGCTCG CCCGTCTGTC CACTCAGGAC GCGACAGCGG TGCGGGCGGC CGATGCGCTG
CTGTTGGCCA CCAGAGGTGG CGCCGATGCG CTCGGCCGCG ACGACATCGG CGCGATCGAG
ACCGGCCGCT GGGCCGACCT GGTGCACATC GACGTGGACG ATCCCGCGTT CGCCACCGGC
CTCGACGTGC CGGACGACCA GTTGCTGGCC AACCTGGTGT GGGCGGCCGG GTCGCGGAGG
GTCACCGACG TGTGGGTGGC GGGCGAGCAC GTGGTCGCCG ACGGCGAACC CACCCGGGTC
GACCGCGCCA AGGCGCAGGC GGACGTGGCC GAAGCCGCCG CCCGCCTGCG CTGA
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| Protein sequence | MTLRLHSAVV LPADPDCSVL RDAVVDIDAH GRIAYCGPAE TAPSGPDAPA TTRKLSGILL
PGLINAHAHS PMVLLRGMGG DLPLLRWLRE VIWPTEAKLR PTDISVGMTL GSVEMLCRGV
TTSAEMYFHP ERIAASVLAT GARVVLGGPI IDLPGIDWRV MLRETDRWID ADGLRFGTGE
RIELSYAPHS AYTLPVEALE AVAESAAARG ALVQIHVAET ADEDTAQRAE HGSVPALLRK
TGLLDGRLLA AHAVHLSDSD IDLFAANGTG VAHCPGSNAK LASGIARLTD LRAASVAVGL
GTDGPASNDD LDLWEEVQLS AMLARLSTQD ATAVRAADAL LLATRGGADA LGRDDIGAIE
TGRWADLVHI DVDDPAFATG LDVPDDQLLA NLVWAAGSRR VTDVWVAGEH VVADGEPTRV
DRAKAQADVA EAAARLR
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