| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39190 |
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| Symbol | |
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| ID | 8389240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4242311 |
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| End bp | 4244116 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977929 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_003135688 |
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| Protein GI | 257057856 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.240452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGAT GGCCAACCCC GGCCGAACGG CGACTGCCCT ACCGTCGAGG CGTGTCCCGA
CGCTCGGTCC GCGATCTCGC CGCGCTGGTG TCGCAACGGT TCGGTCTTCC CGAGATCGCG
CTGTTCGCGG CAGTGCTGTG TGACCTGGTC ATCATCGCCA CGTCGGCCTT CGACGGCATC
GACGCCGTAG TGCAGGAGCT CTGGCTCCTG TCCGGCGTCG TGGCGCTGTG CGCGTGCGCA
CTGTGGTCCG CCACCAGACC GGGACGGGCG GTGATGGCCG GGGCCGCGGT CCTGGTGTCG
TCCAGCGTGT TGTTCAAACT CACCGACACC CCGTCGTTCA CCGCGTTGTT GGAAGGCATC
ACCTTCGCCG AGACGGTGGC GGGTGTCGAG TTGCTGTACT ACGCCGTACT GCGACTGCCG
CCGATCGCGG CGTTCTGCGC GAGCGCGCTG CTGGTGGCGG CCACACTCCT CGCGTCGGCG
GTGCGGACGG ATTTCTGGAA GGACGACACT CCCATAACGA CGCTCTTCGC GGGTGCCGTC
GTGTTCCTGC TGATCGTGCT GGCCGTGGCC TACCAGCGCA TGTCACGACG CCCCCGCCTC
GAGCAGAATC CCCTGACGGC GTTGCTGCGG CAGCAGTGGT TGCTCGTGGC TCCGCTGGCG
ACCCTACTGC TGCTGGAGAT GTTCACCGCC GCCGAAACCG GCTTGTTCGG CCTCCTGGTG
CTGCTGTGCT CGGTCGGCAC GGTCGTGGCC GCCGTCCTGG CACCCCGGGC ACCCGCGTGG
TCGGCGGTCT ACTACAGCGT CTTCATCGTC GTGGCGGGTG CGATCCGGTG GTTCACCGGC
GTGCTGGCCG GCTATGCGGA CCTTCATGGA CTGTCGTACA CGGTGATGCT CAGCGGCATG
GCCGTGGTCG TGTCCGTCGT CCGACACGAA CCGCCGGCCC GGGCCGCGTG GCTGCTCGTA
CTCCAGTCGT CGGCCGTCGC CATGGTCGTC CTGCCCAACA TGCCGAAGAA CCTCGTGGAG
ATCCGGATCA CGTTCGTCAT GGCGTTGTTG GCGCTGGGCA TTTGCGTGGC CATCGGCATG
TTCCTCCGTG CCCGCGACTC CGAACGGGCA CGCGTCATCG CCGCCGCCGT GAGCGACGCG
CAGACTGCCG AGCGGATGGC ACTGGCGCGG GAACTGCACG ACGTCGTGGC GCACCATGTC
ACGGGAATCG TGGTGCAGGC GCAGGCGGCG CGGATGCTCG CCGAACAGAA CCCGGCCGTG
GTGGTGGAGG CGCTCGGGCA GATCGAGAAG GCGGGCACCG ACGCGATGAA GGCGATGCGC
AGGCTCGTGC AGAGCATGCG GGGAGACGCC CCCGCGGGTG CCAGCGAGTT CAGTGAGCAG
GCCACCAGTG ACCTGGCCGC CGACCTGCGA CGCCTGGTGG ACGCGGGGAA CCACGGCGTA
CCGACCGGAC TGGAACTCGA CATCCCCCCC GATCTGCCGC AGGAGGTGTC GCGGTCGACG
CTGCGAGTGG TGCAGGAATC GCTCACCAAC GTCGGTAAGC ACGCCGAGAA CGCGACCAAG
GCGTCCGTCA CGGTGCGCGC CGTGGACGGT GAGCTGCACA TTCGCGTGGC CGACGACGGT
ACGGGCGGCA CCCGGCAGCG CGCGGGCCGG CCGACCGAGG ACTCCGGATA CGGTTTGGTC
GGCATGCGTG AACGCATCGA TCTGCTGCGG GGACGGCTGT CGGCGGGACC GTCGGCCGAG
GGCGGTTGGC TCGTCGAGGC GTGGATACCG TTGGCGAGCG AGGCCGGCAG AAAGGACGAC
GAGTGA
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| Protein sequence | MAGWPTPAER RLPYRRGVSR RSVRDLAALV SQRFGLPEIA LFAAVLCDLV IIATSAFDGI
DAVVQELWLL SGVVALCACA LWSATRPGRA VMAGAAVLVS SSVLFKLTDT PSFTALLEGI
TFAETVAGVE LLYYAVLRLP PIAAFCASAL LVAATLLASA VRTDFWKDDT PITTLFAGAV
VFLLIVLAVA YQRMSRRPRL EQNPLTALLR QQWLLVAPLA TLLLLEMFTA AETGLFGLLV
LLCSVGTVVA AVLAPRAPAW SAVYYSVFIV VAGAIRWFTG VLAGYADLHG LSYTVMLSGM
AVVVSVVRHE PPARAAWLLV LQSSAVAMVV LPNMPKNLVE IRITFVMALL ALGICVAIGM
FLRARDSERA RVIAAAVSDA QTAERMALAR ELHDVVAHHV TGIVVQAQAA RMLAEQNPAV
VVEALGQIEK AGTDAMKAMR RLVQSMRGDA PAGASEFSEQ ATSDLAADLR RLVDAGNHGV
PTGLELDIPP DLPQEVSRST LRVVQESLTN VGKHAENATK ASVTVRAVDG ELHIRVADDG
TGGTRQRAGR PTEDSGYGLV GMRERIDLLR GRLSAGPSAE GGWLVEAWIP LASEAGRKDD
E
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