| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39160 |
|---|
| Symbol | |
|---|
| ID | 8389237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 4238456 |
|---|
| End bp | 4239190 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977926 |
|---|
| Product | tRNA (guanine-N(7)-)-methyltransferase |
|---|
| Protein accession | YP_003135685 |
|---|
| Protein GI | 257057853 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
|---|
| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.312957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGATTCG TGGGAAGCGA GCACAAGCCG GACGAACACG AGCCGCATCG ACCGAGGTGG
CGCAGCGTCG TCAGCTACGT CAACCGTGGC GGGCGGATGA CGCCCGGTCA GCAACGCGCA
TGGGATCGGT TGTGGCCGGT GTGGGGTCGG ACCGTCTCGG AACTGCCGGA AGGGCCGATC
GACTTCGCCG AGTGGTTCGG CAGGCAGGCC CCGGTCGTGT TGGAGATCGG CTCCGGCATG
GGGGAGGCGA CGTCACAGCT CGCTGCCGCC GAACCGGAGG TGAACTACGT CGCCGTCGAG
GTGTACGAGG CGGGGCTCGG TCAGCTCATG CGACGGGCCG AGCAACTCGG CGTGGAGAAC
CTGCGGCTGA TCAAGGGGGA CGCCGTCGTG CTGCTCTCCG AGCACATCGC CCCGGAGTCG
TTGTCGGCGG TGCGGATCTT CTACCCGGAC CCGTGGCCCA AAAAGCGCCA CCACAAGCGC
AGGTTGATCC AGCCGTCGTT CGTGAAGCTG GTGGCCTCCA GGATGGCCCC GAAGGCGACC
CTGCACCTGG CCACCGACTG GGAGGACTAC GCCGAGCAGA TGCTCGAGGT GTGTTCGGCC
GAACCCACGT TGCGTAACCG TTACGACGGT TGGGCACCGC GTCCCGATTT CCGCCCGGTG
ACCAAGTTCG AACAGCGGGC CCGTGAGGAA GGCCGGGAAA GCCGCGATCT GATCTTCGAG
AAGATCTCCG AATAG
|
|---|
| Protein sequence | MRFVGSEHKP DEHEPHRPRW RSVVSYVNRG GRMTPGQQRA WDRLWPVWGR TVSELPEGPI
DFAEWFGRQA PVVLEIGSGM GEATSQLAAA EPEVNYVAVE VYEAGLGQLM RRAEQLGVEN
LRLIKGDAVV LLSEHIAPES LSAVRIFYPD PWPKKRHHKR RLIQPSFVKL VASRMAPKAT
LHLATDWEDY AEQMLEVCSA EPTLRNRYDG WAPRPDFRPV TKFEQRAREE GRESRDLIFE
KISE
|
|---|
| |