| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39020 |
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| Symbol | |
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| ID | 8389223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4222008 |
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| End bp | 4222724 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644977912 |
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| Product | predicted membrane protein |
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| Protein accession | YP_003135671 |
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| Protein GI | 257057839 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2259] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.584509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCC GTCGGGTGGC ACGTCCACTC CTCGCCTCTA TCTTCATCTC GGGTGGCATC
AATGCGCTGC GGCAGAAGGA GGCCCACACC GAGGCCGTCC GGCCGTGGCT CCACAAGGTC
GCTCGCAAGG CCCTGGGGAA CAAGACCGGT GATCCGGAGG ATTCGCTGCC GGCCGCCCCG
ATGACGCTCG TCCAGGTGGA TGCGGTCGCG AAGATCGTCG GGGGCACCAT GCTGTCGCTC
GGCATCATGC CCCGGGTCTC GTCGATGCTC CTGCTGGGCA GTCTCGTTCC CACGACGTTG
GCGGCGCATT CGTTCTGGGA GTACGAGGAC GCCGAACAGC GGCAGCAGCA GACCGTCCAT
TTCCTCAAAA ACGCCGGTCT CGCGGGTGGG TTGTTGTTGG CCATCGCCGA CACGGGCGGC
AAACCGTCAC TCGGTTGGCG GGCCCGCCAC GTGGCCGAGG AGGCGAGTCA CCAGATGCAC
GGTGTCACGG GGACCGTGCA GCGTAAGGCC GGTATGGCCG CCACCAAGGC CGCCAAGGTG
AGCAACAAGG TGAGCGGTAA GGCGGGCAAG ACCACCGGTC TGGTGGCGGG CACCGCGAAG
GGCAAGGGCA AAGCCGCCAA GGCGATGAGG AAGTCGGCGA AGACGGCGTC GAAACCCGCC
ATGGTCGCCA TGCGTTCCAA GCGGCACCGC GGCCGGAAGT CGATGATGGC GTCCTGA
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| Protein sequence | MILRRVARPL LASIFISGGI NALRQKEAHT EAVRPWLHKV ARKALGNKTG DPEDSLPAAP
MTLVQVDAVA KIVGGTMLSL GIMPRVSSML LLGSLVPTTL AAHSFWEYED AEQRQQQTVH
FLKNAGLAGG LLLAIADTGG KPSLGWRARH VAEEASHQMH GVTGTVQRKA GMAATKAAKV
SNKVSGKAGK TTGLVAGTAK GKGKAAKAMR KSAKTASKPA MVAMRSKRHR GRKSMMAS
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