| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39000 |
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| Symbol | |
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| ID | 8389221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4220204 |
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| End bp | 4221172 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977910 |
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| Product | daunorubicin resistance ABC transporter ATP-binding subunit |
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| Protein accession | YP_003135669 |
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| Protein GI | 257057837 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.447872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAC AGGTCGCGGT CCGGGCCCGT GGCCTCGTCA AAAGCTACGG TTCCACGCAA
GCATTGAACG GGGTCGATCT CGACGTCCTC TCAGGCCGAG TCCTCGGTCT GCTCGGCCCC
AACGGCGCGG GCAAGACCAC GGTCGTGCGC ATCCTCACCA CCCTGCTCCG CCCGGACGCC
GGTGAAGCGT CGGTAGCGGG ACACGACGTA CTCACCGAAC CCGACGCCGT ACGCGCGGCC
ATCGGGGTGT CCGGGCAGTA CGCCGCCGTG GACGAGAACC TCACCGGGTT CGAGAACCTC
TACATGATCG GCAGGCTCTA CGGGCTGAGT AAGCGGCACG CCAAACAGCG TTCACGCGAA
CTGCTGAAAC GGTTCCAGCT CGCCGAGGCC GCGGATCGGA CCGCCAGGGG GTACTCCGGC
GGTATGCGCC GACGACTCGA CCTCGCCGGA GCCCTGGTGG CCGAGCCGAA AGTCGTCGTC
CTGGACGAGC CCACGACAGG CCTGGACCCG CGCGGCAGGC TCGAGATGTG GCAGGTCATC
GAACAGCTCG TGGCCACCGG AGCCACCGTC CTGCTCACCA CCCAGTACCT CGAAGAGGCC
GACCGGCTCG CCGACTCCAT CGTCGTCATC GACAAAGGCG TGGTCATCGC GCGCGGCACC
GCCGAGGAAC TGAAACAGCG CATCGGCGGT GAACGACTCG AACTCGTCCT CGAGGACGCG
GCGGACGTGC CTCGTGCCGT GCGGATACTC GAAGAGGTCG GCACCAGCGA ACCGGTCGTG
GAAGAACCCA TCCGCACGGT GACGGTGTCC GTCGACGCGG GCGCGAAGGC CCTGGTGCAA
GCACTGCGCA AACTCGACGC ACAACACCTC GCCCTCCAGG ACGTGGCACT GCGCCGTCCC
ACGCTCGACG ACGTCTTCCT GGCACTCACC GGACGCGCCA CCGCCACCGA CGAGGAGACG
ACATCATGA
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| Protein sequence | MDEQVAVRAR GLVKSYGSTQ ALNGVDLDVL SGRVLGLLGP NGAGKTTVVR ILTTLLRPDA
GEASVAGHDV LTEPDAVRAA IGVSGQYAAV DENLTGFENL YMIGRLYGLS KRHAKQRSRE
LLKRFQLAEA ADRTARGYSG GMRRRLDLAG ALVAEPKVVV LDEPTTGLDP RGRLEMWQVI
EQLVATGATV LLTTQYLEEA DRLADSIVVI DKGVVIARGT AEELKQRIGG ERLELVLEDA
ADVPRAVRIL EEVGTSEPVV EEPIRTVTVS VDAGAKALVQ ALRKLDAQHL ALQDVALRRP
TLDDVFLALT GRATATDEET TS
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