| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38980 |
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| Symbol | |
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| ID | 8389219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4218833 |
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| End bp | 4219516 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644977908 |
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| Product | predicted transcriptional regulator |
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| Protein accession | YP_003135667 |
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| Protein GI | 257057835 |
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| COG category | [K] Transcription |
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| COG ID | [COG2345] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.224928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGA CGTCGTTGAC CGACGAGGCG TCCGGCCCGG CGCTGGGCCG AAGCCGGACG
CGTGTGCTGG AGCTGCTGCG TACGACCGAC GGTCCGCTCA CGGCGCACCA GGTCGCCCAG
CGGGTCGGCT TCCACGTCAA CACGGCCCGC TTCCATCTGG ATGCCCTGGT CGAGGCGGGA
TTGGCGCAGC GCGGCACCGA GGGGGCGGGT CGGCCGGGTC GGCCGCGCAT GGTGTACCGC
GCCGTCGCGC ACCGCGCCTC CGAAGGGCCG CGCAGCTATC GACTGCTCGC CACGATGCTC
AGCACTCTGA TCGACAGGGT GATGCCCGAG CCGAGAGAGG CCGCGATCGC GGCGGGGCGG
GAATGGGGTC GTTACCTCGC CAAGCGCCCG GCCCCGTTCG AGCACGTCGA TGCCGAGGAG
GGGATCCGGC GGGTGGCGAA CGTCCTCGCC GAGGCCGGTT TCGCGCCGGG TGAGGTGAGT
GGTGCGGGTC CCCGAGTCCT GCCGCTGCGG CACTGCCCTT TCCAGGAGGT CGCTCGGGTG
CACGGTGACG TGGTGTGTTC CTTGCATCTG GGCTTGATGC AAGGGGTCTT GGCCGAGGTG
GGAGCGCCGG TCACCGCCCG GCGATTGGAG CCGTTCGTCG AGCCGTCGCT GTGCCTGGCG
CATTTCGATC AGCAGAGCGC CTGA
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| Protein sequence | MPETSLTDEA SGPALGRSRT RVLELLRTTD GPLTAHQVAQ RVGFHVNTAR FHLDALVEAG
LAQRGTEGAG RPGRPRMVYR AVAHRASEGP RSYRLLATML STLIDRVMPE PREAAIAAGR
EWGRYLAKRP APFEHVDAEE GIRRVANVLA EAGFAPGEVS GAGPRVLPLR HCPFQEVARV
HGDVVCSLHL GLMQGVLAEV GAPVTARRLE PFVEPSLCLA HFDQQSA
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