Gene Svir_38890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38890 
Symbol 
ID8389210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4210305 
End bp4210772 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID644977899 
Productprotein affecting phage T7 exclusion by the F plasmid 
Protein accessionYP_003135658 
Protein GI257057826 
COG category[R] General function prediction only 
COG ID[COG3030] Protein affecting phage T7 exclusion by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.700662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.406988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA TGTTTCTGCT TTGGGTGATC GCCGAGGTCG CCGCGGTGTG GGCCGTGGCC 
TCCGCCATCG GCCTGTGGGC CACGCTTGCC CTGTTGCTCG CCGGGGCGCT GGTGGGTTCG
TGGCTGGCTC GTCGCGAGGG CGGCAAGGCG ATCCGCGCGG TCATGGAGAC GGCGAGGTCC
GGTCGATCCC CGCACAACGA GATCACCGAC AGCATGCTCG TGGGGCTGGG CGGTCTGTTG
ATCTTCGTAC CGGGGTTCAT CACCGACGCC GCGGGGCTGT TGTTGCTGCT GCCGCCTACC
CGTAAGGTGG TGCGCCGCGT GTGGCTGCGT CGACTCAAAC GTCGTGGTCC GCTGCGGGCC
GGAGGGTTCG CGAGCCGGAG CCGGGTGATC GTGGTGGACA GCGAGGTCGT GCCCGACGCC
GATGACCGCC ACGACCCACC GCAACGCCGG GTGATCGAGT CCGAGTGA
 
Protein sequence
MAAMFLLWVI AEVAAVWAVA SAIGLWATLA LLLAGALVGS WLARREGGKA IRAVMETARS 
GRSPHNEITD SMLVGLGGLL IFVPGFITDA AGLLLLLPPT RKVVRRVWLR RLKRRGPLRA
GGFASRSRVI VVDSEVVPDA DDRHDPPQRR VIESE