| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38870 |
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| Symbol | |
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| ID | 8389208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4207659 |
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| End bp | 4208696 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977897 |
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| Product | pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit |
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| Protein accession | YP_003135656 |
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| Protein GI | 257057824 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.478414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCC CCGTGAAGGC CCCCAACACG AACGCGACGC AGTCGGCGTC GAACGTGCAG
AACCTCACCA TCGGCAAGGC CCTCAACGCG GGCCTGCGTG CCGCGATGGA GGCCGACGAC
AAGGTCATCG TGCTGGGCGA GGACGTCGGC AAGCTCGGCG GCGTCTTCCG CATCACCGAC
GGTCTGCAGA AGGACTTCGG TGAACACCGC GTGCTCGACA CGCCGTTGGC CGAGTCGGGC
ATCATCGGCA CCGCGGTCGG GCTGGCCGTG CGCGGCTTCC GACCGGTGTG CGAGATCCAG
TTCGACGGGT TCGTCTTCCC CGCCTTCGAC CAGATCGTCA GCCAGTTGGC GAAGCTGCAC
TACCGCACGC AGGGCGGACT CAAGGTGCCC GTGGTGGTCC GCATCCCGTT CGGCGGGGGG
ATCGGCTCGG TCGAGCACCA CTCGGAATCA CCGGAGTCGC TGTTCGCACA CACCGCGGGT
CTCAAGGTCG TGGCGTGTTC GAACCCGGTG GACGCCTACT GGATGATCCA GCAGGCCATC
CGGTGCGACG ACCCGGTGGT GTTCTTCGAG CCGAAGCGCT TCTACCACTC GGGGGCGTTG
AAGGCGCCGG TGGACCCCTC GGCCACACCC GACCCGCTGT TCGCCTCGCG CGTCGTGCGA
CAGGGCACGG CGGCCACCCT GGTGACGTAC GGCCCGTCGG TGCGGGTGTG CCTCGACGCC
GCCGAGGCCG CGGCCGAGGA GGGCACGGAG CTGGAGGTCA TCGACCTACG CGCACTGTCG
CCGTTGGACC TGGGCCCGGT GTTCGAGTCG GTGCGTCGCA CCGGCCGGCT GATCGCGGTG
AGCGAGGCCC CGCCGGAGGC GTCGATCACC TCCGAGATCG CGGCCCGGGT GCAACAGGAG
TGCTTCTACT CGCTGGAGGC GCCGGTGCTG CGGGTGACCG GATTCGACAC CCCGTACCCG
CCGGCCAAGG CGGAGGAGCA TTTCCTGCCG GACCTCGACC GGGTACTCCA CGCCGTCGAC
CGCGCTCTGG ACTGGTGA
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| Protein sequence | MAAPVKAPNT NATQSASNVQ NLTIGKALNA GLRAAMEADD KVIVLGEDVG KLGGVFRITD
GLQKDFGEHR VLDTPLAESG IIGTAVGLAV RGFRPVCEIQ FDGFVFPAFD QIVSQLAKLH
YRTQGGLKVP VVVRIPFGGG IGSVEHHSES PESLFAHTAG LKVVACSNPV DAYWMIQQAI
RCDDPVVFFE PKRFYHSGAL KAPVDPSATP DPLFASRVVR QGTAATLVTY GPSVRVCLDA
AEAAAEEGTE LEVIDLRALS PLDLGPVFES VRRTGRLIAV SEAPPEASIT SEIAARVQQE
CFYSLEAPVL RVTGFDTPYP PAKAEEHFLP DLDRVLHAVD RALDW
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