| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38860 |
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| Symbol | |
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| ID | 8389207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4206529 |
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| End bp | 4207659 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977896 |
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| Product | pyruvate dehydrogenase E1 component, alpha subunit |
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| Protein accession | YP_003135655 |
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| Protein GI | 257057823 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.666608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAGCGG GCCTGCGAGC CACCACCGAA GGCGGAGCTG AACTGACCCA GCTTCTGAAT
CCCGAAGGCG AACGCCTGCC CTCGCCGGAG TTCGATCCTT ACGTCGCCGA CATCGACGCC
GAAGCGCTGC GCGGCCTCTA CCGTGACATG GTCCTGGTCC GCCGCGGCGA CCGCGAGTGC
AACGCCATGC AACGGCAGGG GCAGCTCGGT ATCTGGGTTC CGCTCCTCGG CCAGGAGGCC
GCCCAGATCG GCTCGGGACG CGCCCTGAAA CCGCAGGACA TGGCGTTTCC CAGTTACCGC
GAACACGGGG TGGCCTACAC CCGCGGGGTG AGCTTCACCG AGCTGCTTGG CATCTTCCGC
TGCACCGACC ACAGCGGCTG GGACTTCCGC CGCCGCAGGT TCCACCCGTA CACCATCGTG
ATCGGCAACC AGGTGCTCAA CGCCACCGGC TACGCGATGG GACAGAAGTT CGAGGGCAAG
GTCGGTGACG GCCCCGACGC CGAGGCCACG ATCTGCTACT TCGGGGACGG CGCCACCAGC
CAGGGCGACG TCCACGAGGG CTTCGTGTGG GCCTCCGTGT ACGACGCCCC GGTGGTGTTC
TTCTGCCAGA ACAACCAGTG GGCCATCTCC GAACCCACCG AACGGCAGAC CCGACTGCCG
CTGTACCAGC GCGCCCGCGG CTACGGCTTC CCCGGCATCC GCGTCGACGG CAACGACGTG
CTCGCCTGCC TGGCCGTCAC CCGCTGGGCC CTGGAGGAGT GCCGCCGCGG CAACGGTCCG
GTGCTGATCG AGGCGTTCAC CTACCGCATG GACGCCCACA CCACCACCGA CGACCCGACG
CGTTACCGCC TGGCGGACGA GGTGGAGGCG TGGAAGCTCA AGGACCCCAT CGAGCGTGTC
CGCGTGCACC TGACCCGTAC CGGCAACGCC GACCAGGCGT TCTTCGACGA AGTGGAGGCC
GAGGCCGACA GGTTCGCGGC CGAGTTGCGT GACTTCTGCT TCAACATGCC TGATCCGCCA
CCCGAGCGGG TCTTCTCCGC CGTCTACGCG GAACCGTCCC CGCAGTTGGA CGCACAGCGC
GAGGAGTACC TGGCATATCT CTCCGGTTTC GCCGATGGAG GTGAGCGGTG A
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| Protein sequence | MIAGLRATTE GGAELTQLLN PEGERLPSPE FDPYVADIDA EALRGLYRDM VLVRRGDREC
NAMQRQGQLG IWVPLLGQEA AQIGSGRALK PQDMAFPSYR EHGVAYTRGV SFTELLGIFR
CTDHSGWDFR RRRFHPYTIV IGNQVLNATG YAMGQKFEGK VGDGPDAEAT ICYFGDGATS
QGDVHEGFVW ASVYDAPVVF FCQNNQWAIS EPTERQTRLP LYQRARGYGF PGIRVDGNDV
LACLAVTRWA LEECRRGNGP VLIEAFTYRM DAHTTTDDPT RYRLADEVEA WKLKDPIERV
RVHLTRTGNA DQAFFDEVEA EADRFAAELR DFCFNMPDPP PERVFSAVYA EPSPQLDAQR
EEYLAYLSGF ADGGER
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