| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38830 |
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| Symbol | |
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| ID | 8389204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4202788 |
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| End bp | 4203597 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644977893 |
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| Product | amino acid ABC transporter membrane protein |
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| Protein accession | YP_003135652 |
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| Protein GI | 257057820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.834916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATGT CGCGGCGCAA GCGCGCAAAA GTGATCCGCG GTGGTCAGTA CGCCGTACTC
GTACTGGTCT TCGCGCTGTT GGCGTTCCTC GCCGACTGGG AAACCATCAA GGACGCGTTC
TTCAACGTCG AGGCCGCGTC GGCGCAGTTC CCCGAGATCC TGAGCACCGC GTTGGTCAAC
ACCATCGTGT ACACGGCGCT CGGATTCGGT CTGGGGCTCG TCATCGGCAT GGTGCTTGCC
CTGATGAAAC TGTCGTCCGT CGGTCCCTAT CGCTGGCTGG CGACGTTGTA CATCGAGTTC
TTCCGCGGGA TTCCGGCGCT GTTGGTGTTC ATCGCCCTCG GCTACGGGGT GCCGCTGGCG
TTCGGTATCC GGTTCGACAT CTACTCCACC GCCGCGATCG CGTTGGGGTT GGTCGGCTCC
GCCTACATCG CCGAAACACT GCGCGCAGGT ATCCAGGCCG TCCCGAAGGG ACAGGTCGAG
GCCGCGCGGT CGCTGGGCAT GTCGCAGGCG AGGACCACGG TCACGGTGGT GATCCCGCAG
GCGTTCCGGA TCATCCTGCC GCCGTTGACC AACGAGCTGA TCCTGCTCAC CAAGGACTCG
TCGCTGATCT ACCTGCTGGG TTTGGCGCGG GAGGAGTACG AACTGGCCAA GTTCGGCCGG
GAGGGGCTGA ACGCGACCGG TTCGCTCACC CCGATCCTGC TCGCCGGGGT GTGTTACCTG
ATCATCACTG TGCCGTTGGG GTACCTGTCG CGGTACCTGG AACGCCGTAG TGGCCGCAAG
GAGGAGCGAG GGTTGAAGGT GACGGCCTGA
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| Protein sequence | MAMSRRKRAK VIRGGQYAVL VLVFALLAFL ADWETIKDAF FNVEAASAQF PEILSTALVN
TIVYTALGFG LGLVIGMVLA LMKLSSVGPY RWLATLYIEF FRGIPALLVF IALGYGVPLA
FGIRFDIYST AAIALGLVGS AYIAETLRAG IQAVPKGQVE AARSLGMSQA RTTVTVVIPQ
AFRIILPPLT NELILLTKDS SLIYLLGLAR EEYELAKFGR EGLNATGSLT PILLAGVCYL
IITVPLGYLS RYLERRSGRK EERGLKVTA
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