Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38670 |
Symbol | |
ID | 8389188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4186896 |
End bp | 4187678 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977878 |
Product | uncharacterized protein with SCP/PR1 domains |
Protein accession | YP_003135638 |
Protein GI | 257057806 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAGCTT GCCGCCTTGT GTCTACCCCG AGCCCGCGAA TCCGGTCACT GTTAGTGATG GTCAGCGTGC TCGTAGGGGT GGTTGCCGCT GCCAGTGTTC ACCTGTTCTG GTTGCCGCCG TCGAATGACG ACACGACACT CGCCCGGTCC GAGGAGCCCG ACCCCGAGCT CGAACACGGC GCTCGGCCAG GCGGCGGCGA GACGAGGACC GCGCCACCAT CCACCTCCGG TGGGAAGACG GTGTCGACGA CGTCCACCCC GAGCCCGACC ACGCCGGAAC CCGAACCGGA AGCCTCGGCG GAGCCGATCC CATCCGGTGT CGCTTCGTCC AATCCAGACG AATCGTCCGT GGAGGGATCC GCCACCGAGA ACACCGGGTC CACGGAGTCG TCCGAACCTC CGGCCTCGAA CGCCGGCGAC CACGCCGAGC AGGTGGTCGC ACTGGTCAAC GACGCACGCG CCGAAGCCGG ATGCGCTCCC GTGCGCGTGG ATCACCGACT GACCGAGTCG GCCCAGGCCC ACAGCGACGA CATGGCCGAA CACAACTACC TGTCGCACAC CTCGCTCGAC GGCACGACGT TCGACGAGCG GATCTCCGAG GCCGGGTATC CGCATCCGGC CGCGGAGAAC ATCGCCATGG GCATGGCCAG CGCCGAAGCG GTGATGGACG CCTGGATGGA CTCCGAGGGA CACCGCCGCA ACATCGTGAA CTGCAAGATC ACGGCCATCG GGGTCGGTGT GAACCCCGAC GGCTGGTACT GGACGCAGAA CTTCGGTTAC TGA
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Protein sequence | MVACRLVSTP SPRIRSLLVM VSVLVGVVAA ASVHLFWLPP SNDDTTLARS EEPDPELEHG ARPGGGETRT APPSTSGGKT VSTTSTPSPT TPEPEPEASA EPIPSGVASS NPDESSVEGS ATENTGSTES SEPPASNAGD HAEQVVALVN DARAEAGCAP VRVDHRLTES AQAHSDDMAE HNYLSHTSLD GTTFDERISE AGYPHPAAEN IAMGMASAEA VMDAWMDSEG HRRNIVNCKI TAIGVGVNPD GWYWTQNFGY
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