Gene Svir_38670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38670 
Symbol 
ID8389188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4186896 
End bp4187678 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID644977878 
Productuncharacterized protein with SCP/PR1 domains 
Protein accessionYP_003135638 
Protein GI257057806 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGCTT GCCGCCTTGT GTCTACCCCG AGCCCGCGAA TCCGGTCACT GTTAGTGATG 
GTCAGCGTGC TCGTAGGGGT GGTTGCCGCT GCCAGTGTTC ACCTGTTCTG GTTGCCGCCG
TCGAATGACG ACACGACACT CGCCCGGTCC GAGGAGCCCG ACCCCGAGCT CGAACACGGC
GCTCGGCCAG GCGGCGGCGA GACGAGGACC GCGCCACCAT CCACCTCCGG TGGGAAGACG
GTGTCGACGA CGTCCACCCC GAGCCCGACC ACGCCGGAAC CCGAACCGGA AGCCTCGGCG
GAGCCGATCC CATCCGGTGT CGCTTCGTCC AATCCAGACG AATCGTCCGT GGAGGGATCC
GCCACCGAGA ACACCGGGTC CACGGAGTCG TCCGAACCTC CGGCCTCGAA CGCCGGCGAC
CACGCCGAGC AGGTGGTCGC ACTGGTCAAC GACGCACGCG CCGAAGCCGG ATGCGCTCCC
GTGCGCGTGG ATCACCGACT GACCGAGTCG GCCCAGGCCC ACAGCGACGA CATGGCCGAA
CACAACTACC TGTCGCACAC CTCGCTCGAC GGCACGACGT TCGACGAGCG GATCTCCGAG
GCCGGGTATC CGCATCCGGC CGCGGAGAAC ATCGCCATGG GCATGGCCAG CGCCGAAGCG
GTGATGGACG CCTGGATGGA CTCCGAGGGA CACCGCCGCA ACATCGTGAA CTGCAAGATC
ACGGCCATCG GGGTCGGTGT GAACCCCGAC GGCTGGTACT GGACGCAGAA CTTCGGTTAC
TGA
 
Protein sequence
MVACRLVSTP SPRIRSLLVM VSVLVGVVAA ASVHLFWLPP SNDDTTLARS EEPDPELEHG 
ARPGGGETRT APPSTSGGKT VSTTSTPSPT TPEPEPEASA EPIPSGVASS NPDESSVEGS
ATENTGSTES SEPPASNAGD HAEQVVALVN DARAEAGCAP VRVDHRLTES AQAHSDDMAE
HNYLSHTSLD GTTFDERISE AGYPHPAAEN IAMGMASAEA VMDAWMDSEG HRRNIVNCKI
TAIGVGVNPD GWYWTQNFGY