Gene Svir_38550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38550 
Symbol 
ID8389176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4173942 
End bp4174394 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content69% 
IMG OID644977866 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003135626 
Protein GI257057794 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0289644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCTGG CGATGTTCGG TTCGAGCCCA CCCGGCGGAC TGCCCCACGG AGCTGACGAG 
GACACGCCGG TCTTCGTGAT CTCGGTGGCG GCGCAGCTGT CCGGACTGCA CGCGCAGACG
TTGCGGTCGT ACGACAGGCT GGGACTGGTG AGCCCGGGCC GGACACCCGG CGGTGGACGG
CGTTACTCCA TGCGTGACAT CGCGCAGCTG CGTGAGGTGC AGCGGTTGTC GCAGGAGGAG
GGCGTCAACC TCGCGGGTAT CAAGCGGATC CTCGAGTTGG AGAACCAGGT CAGCGAGTTG
CAGCAGCGGG TTGACGAGCT GACCGAGGAA CTCGCCGCGG CGTACGCGGC GGCGGAGCAG
GCGGCCGCCG CCGTCCACGC CTCCTACCGC AGGGAGCTCG TCCCGGTCCG CAGGCAGAAC
GCCTTGGTGG TGTGGCGTCC CAATCGACGC TGA
 
Protein sequence
MRLAMFGSSP PGGLPHGADE DTPVFVISVA AQLSGLHAQT LRSYDRLGLV SPGRTPGGGR 
RYSMRDIAQL REVQRLSQEE GVNLAGIKRI LELENQVSEL QQRVDELTEE LAAAYAAAEQ
AAAAVHASYR RELVPVRRQN ALVVWRPNRR