Gene Svir_38460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38460 
Symbol 
ID8389167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4164617 
End bp4165465 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content66% 
IMG OID644977857 
ProductProtein of unknown function (DUF574) 
Protein accessionYP_003135617 
Protein GI257057785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG AACAGGTGCT CGGAAAGCGA TCCGTCCCTG TTGAAGTTGA CCAGACCAAA 
GCCAGCATCG CCCGGGTCTA CGACGCAGCG CTCGGCGGCA AGGACAATTA CGCCGTAGAC
AGAGAAGTCC TCGAGCAGGC GCGCGCCGTG ACACCGGCGA TCGAGGAATT GGCTTGGGCC
AACCGGAACT TCCTCGTCAG AGCCGTGCGG TTCCTTGCGA TCCACGCCGG GATCACGCAG
TACCTCGACT GCGGTTCAGG TCTGCCGACC GCCGAGAACA CCCACCAGAT CGTGCAGCGG
TACCACCCCT CGGCCGAGGT GGTGTACGTC GACAACGACC CGGTGGTGCT CGCGCACGGC
AACGCGCTGC TGGCCGACAA CGACTCCACG CACATGGTGG ATGCGGACAT CTTCGAGCCG
GCTCAGGTGC TCGGCCACAG CACGGTGACC GAACACCTCG ACTTCGACCG CCCCATAGCG
CTGCTCCAGG TCAGCACGTT GCACCACTAC ACGGGCGATC TGGCCGACAT GATGCGCGGC
TATCTCGACG CGCTGGCGCC CGGTTCCTAC TTCGTGTTCT CCCACCTGCT GGACCCGGAG
ACACCCGAGC TGACCCCCAC GGCCCGCCAG TTGGAGCAGG TGGCGTTGAA CAGCTCGATG
GGGTCGGGAA CGTTCCGTAC CCGCAAGGAG ATGGAGCGCG TCGTCGAAGG CTGGGAGATC
GTGCCGCCGG GGCCGAACGA GGCTCCCCGG GCGGCGTTGT GTGACGAGTG GTGGCCGGAC
GGCCCGAAGC TGCGGCCGCG CACCGCGACG GAGCACTTCT TCGGCTGCAT CGTGGCGCGC
AAACCCTGA
 
Protein sequence
MAEEQVLGKR SVPVEVDQTK ASIARVYDAA LGGKDNYAVD REVLEQARAV TPAIEELAWA 
NRNFLVRAVR FLAIHAGITQ YLDCGSGLPT AENTHQIVQR YHPSAEVVYV DNDPVVLAHG
NALLADNDST HMVDADIFEP AQVLGHSTVT EHLDFDRPIA LLQVSTLHHY TGDLADMMRG
YLDALAPGSY FVFSHLLDPE TPELTPTARQ LEQVALNSSM GSGTFRTRKE MERVVEGWEI
VPPGPNEAPR AALCDEWWPD GPKLRPRTAT EHFFGCIVAR KP