| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38430 |
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| Symbol | |
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| ID | 8389164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4159646 |
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| End bp | 4161304 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977854 |
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| Product | PAS domain S-box |
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| Protein accession | YP_003135614 |
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| Protein GI | 257057782 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAGTG TGCTCGACAC GGCGTTCCTC ACATATGTTG AGAGTGGCGT CACGCGCGAA
AGTCCCGCGC ACGGACGCCA GGTGAGCGAG GCGGGAGGTG TGACCATGAG CCATACCGCT
GCCCGGAGCG AGACCACGTT CGACACCGCG GTGTTGCGCG AGCTGGTGGA GTTGTCCGGT
GACGGACTCG CAGTGCTCGA CGACCGCGGT CATTTCGTGA CGGTCAATCC GGCAGGTGTG
CGCATCCTCG GGGTTCCGGA AGACCGACTG CTCGGCACTC GCTCCCCCTT CGACGTCTCG
CGGCGGAACG TGACTTCGGG CTCGGACGAG ATGGAGCGCG CCGAGTGGAC GGCGCCCGAT
GGACGCAGGC GGTACCTGGA GTACCGCGTG TCCGAGCTGG CTAACGGGGG TGTGGCGGTC
TGGTTCACCG ACATCACCGA GATCCTGCTT CAACAGGAGC GGCTCACGGC CATCACACGC
GCGGCGTCGA GCGTGGCCGA TTCGGGGTCG TTGCGCGCGA CGCTCGATGC GATGGCACGG
GAAGTGTGCA CCACCACCGC CATCTCCGCG GCCCAGATCC TCGCCGTCGA CGACCCGCGC
GACGAACTGC GACTGCTCGG TATGGCGGGA TTCGGCGAGA CGACCGACTT CGTGGAGCGG
CTCGCCGAGT GCAGGCGGCG CGGCGCGGAC ATCCGCTTTT TGGAAGTGCT CGAACACGGT
GAACCGGTGG TCGTGCTCCA CCGCAAGCCG GTCATCATGG CGGACCCCGC GTGGGAACCA
CTGCACGTGA TCATGGACTG GCCCGACTGG GACAGCTTCG TGTCGATGCC GCTCGTGGTG
CGAGGACGCA CGGTCGGGAT CATCAACGCC TACTACGCGC CGGGCGAGGA CCCGGGGCCG
AGCTCGCTGA CGTTCCTCTC CGCGATGGCC GACCACGCCG CGGTCGCCAT CGAGACGGCG
GCTTTGCTCA CCCGTACCCG GTCGCGCGCC CAGCTCGACG AACGGCGCAA ACTCGCCCGG
GACCTGCACG ATTCCGTGGT GCAGCACCTG TTCTCGATGG GGATGCAGGC CAAGGCGTTG
CGGGCCCAAC TGGAACGCCC GGACGCCGAT CTGAGCCAAC TGCGCGGTGG GGCACAGGAA
TTGGCGGAAC TGTCCCAGAA CGCGCTCGCC GATCTGCGTG GCCTCGTGTT CGAGCTACGT
CCGATGGAGT TGGCCGAACG CGGCCTCGTG GACGCCGTGC GGTCGCATGC CGCGAGCCTG
CAGGCGCGCA CGGGACTGAC GATCGACGTG CGTGCCCCCG TGGGCGATGC CCTCGACCTG
GATCTCGAAG TGGCCGAGGA CGTCTACCGC ATCGTGCAGG AGGCCCTGCA CAACGTGATC
AAGCACGCCA ACGCGACCAA GGCCGAGGTC ACGATCACGA CCCCGGAGCA CGATCATCGG
GGGTTGCTGG TGAAGATATC CGACAACGGA CGTGGCAAAG GGCAGAAGCC ACGTGACCGT
ACCGCCTTCC GACGAGAGAG TCTCGGCCTT CAGTCCATGC GGGAACGTGC CGAACGATGG
CGGGGACGGT TGGTCGCGGG ACCGCGTCCC TCGGGTGGTT GGACGGTGGC GGTGAGCCTG
CCCGCGCAGG GCTCCTACGC GATGAAGGAG GCGTCCTGA
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| Protein sequence | MASVLDTAFL TYVESGVTRE SPAHGRQVSE AGGVTMSHTA ARSETTFDTA VLRELVELSG
DGLAVLDDRG HFVTVNPAGV RILGVPEDRL LGTRSPFDVS RRNVTSGSDE MERAEWTAPD
GRRRYLEYRV SELANGGVAV WFTDITEILL QQERLTAITR AASSVADSGS LRATLDAMAR
EVCTTTAISA AQILAVDDPR DELRLLGMAG FGETTDFVER LAECRRRGAD IRFLEVLEHG
EPVVVLHRKP VIMADPAWEP LHVIMDWPDW DSFVSMPLVV RGRTVGIINA YYAPGEDPGP
SSLTFLSAMA DHAAVAIETA ALLTRTRSRA QLDERRKLAR DLHDSVVQHL FSMGMQAKAL
RAQLERPDAD LSQLRGGAQE LAELSQNALA DLRGLVFELR PMELAERGLV DAVRSHAASL
QARTGLTIDV RAPVGDALDL DLEVAEDVYR IVQEALHNVI KHANATKAEV TITTPEHDHR
GLLVKISDNG RGKGQKPRDR TAFRRESLGL QSMRERAERW RGRLVAGPRP SGGWTVAVSL
PAQGSYAMKE AS
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