| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38380 |
|---|
| Symbol | |
|---|
| ID | 8389159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 4156291 |
|---|
| End bp | 4156575 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977849 |
|---|
| Product | muconolactone delta-isomerase |
|---|
| Protein accession | YP_003135609 |
|---|
| Protein GI | 257057777 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4829] Muconolactone delta-isomerase |
|---|
| TIGRFAM ID | [TIGR03221] muconolactone delta-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTT TGGTCAGGTC GGAGAACCGG TTGCCTCCGA CGACACCGCC GGAGGAGCGG
GAACGGCTCC GGGCCGCTGA ACGCGAGCGG GCCATGGAGC TTCGTGCTCA GGGCGTGTTG
AAGCGGCTGT GGCGAGTCCC CGGCCGCAAC GCCACGATCG GTCTTTACGA GGCCGACGAC
GCGACCCAGC TACACGACGC TTTGATGTCG CTGCCGATGG CGCCGTGGCT GGACATCACA
GTGGAGCCGC TGGCGACTCA TCCGCAGGAG AGGGGCACCT CATGA
|
|---|
| Protein sequence | MEFLVRSENR LPPTTPPEER ERLRAAERER AMELRAQGVL KRLWRVPGRN ATIGLYEADD
ATQLHDALMS LPMAPWLDIT VEPLATHPQE RGTS
|
|---|
| |