Gene Svir_38270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38270 
Symbol 
ID8389148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4147140 
End bp4147625 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID644977838 
ProductPyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003135598 
Protein GI257057766 
COG category 
COG ID 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAC GTGACGAGAC CCGGATGAGC CCGGAGGAGC TCGTGCGCTA TGTCACCGAG 
CGCACCGTGA TCACCCTGGC CACCCTCGGC CCGAACGGCC GACCGCACCT GACACCGCTG
TGGTACGTCC CCCGCGACCT CGACCCGGAC GCCGACCCAC CGCTGCGGCT GACCACCTGG
ACCTACGGGA AGTCACAGAA GGCCGTGAAC CTGCGGCGCG ACCCGCGGGC GACCCTGCTG
ATCGAGTCCG GCGACTCCTA CGACCAGCTC CGCGGTGTGT CGATGGAGTG CGACGTCGAA
CTCGTCACCG ACACCGACGC CGTAGCCGCC ATCGGACTCG ACCTCGCCCG CCGCTACACC
CCGGAGGGCG AGGTCGACGC ACTCCGACAA GCGGTGACCG CGCAGGCACC GAAGCGGGTC
GGGTTGGTCT GCACCCCCAC GAAGATCGTC AGCTGGGACC ACACGAAGCT CGGCGCGGGT
TACTGA
 
Protein sequence
MSRRDETRMS PEELVRYVTE RTVITLATLG PNGRPHLTPL WYVPRDLDPD ADPPLRLTTW 
TYGKSQKAVN LRRDPRATLL IESGDSYDQL RGVSMECDVE LVTDTDAVAA IGLDLARRYT
PEGEVDALRQ AVTAQAPKRV GLVCTPTKIV SWDHTKLGAG Y