Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38270 |
Symbol | |
ID | 8389148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4147140 |
End bp | 4147625 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977838 |
Product | Pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_003135598 |
Protein GI | 257057766 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03618] PPOX class probable F420-dependent enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGAC GTGACGAGAC CCGGATGAGC CCGGAGGAGC TCGTGCGCTA TGTCACCGAG CGCACCGTGA TCACCCTGGC CACCCTCGGC CCGAACGGCC GACCGCACCT GACACCGCTG TGGTACGTCC CCCGCGACCT CGACCCGGAC GCCGACCCAC CGCTGCGGCT GACCACCTGG ACCTACGGGA AGTCACAGAA GGCCGTGAAC CTGCGGCGCG ACCCGCGGGC GACCCTGCTG ATCGAGTCCG GCGACTCCTA CGACCAGCTC CGCGGTGTGT CGATGGAGTG CGACGTCGAA CTCGTCACCG ACACCGACGC CGTAGCCGCC ATCGGACTCG ACCTCGCCCG CCGCTACACC CCGGAGGGCG AGGTCGACGC ACTCCGACAA GCGGTGACCG CGCAGGCACC GAAGCGGGTC GGGTTGGTCT GCACCCCCAC GAAGATCGTC AGCTGGGACC ACACGAAGCT CGGCGCGGGT TACTGA
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Protein sequence | MSRRDETRMS PEELVRYVTE RTVITLATLG PNGRPHLTPL WYVPRDLDPD ADPPLRLTTW TYGKSQKAVN LRRDPRATLL IESGDSYDQL RGVSMECDVE LVTDTDAVAA IGLDLARRYT PEGEVDALRQ AVTAQAPKRV GLVCTPTKIV SWDHTKLGAG Y
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