Gene Svir_38140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38140 
Symbol 
ID8389135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4133375 
End bp4134154 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID644977825 
Producthypothetical protein 
Protein accessionYP_003135585 
Protein GI257057753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCA CGATGCCGGG CGGCGGCGTG GTGTTGTCCA CGTTGGAGTT CGACGTGCTG 
TGGGAACACC TGGGGTTGCC GCAACGTCAT GTGGCCCTTG ACGTGCCAAG CCCTGGGGTC
ACGTACACCG AACGCGCCCG ATTCGTCGAA CAGGCGTGGG ATTCACTCGC TGCGCGCGGA
CTCGTCCAGG GTCGCGAGAC GACGGTGGAA CTCGGCGACC TGTTGCATCT GCTGGCCAGG
CCGCAGCTGA GTGTCGATGT GTGGGTGTGG ACGGACAGGC AGATCTCCGG CCTCGCCGCC
TGTACGGGGC AGCAGGCCGT GCTCGGTGTC GTCGACGGCG ATGAGGTGTG GCTCATCCCC
GCCCGGGATT CGGCGCTCGC GGCGTCGGCC GTGTCCGTGG CGGGGGAACT CGGGCCTGGC
GTGGGGCGCT CGGTGAGTCT GCCGCACGAC GTTCTGGTGG CCGCCGACGC CGAGGCCCGC
GGGGACGCGA AAGCACTCGC CACGGCGTTG GAGGACCGGG GCGTCGAGCT GTGGCAGGCC
CAGGAGCTGG CCGGGATGCT GTTCGGCACG GTCACGCGTG GCCAGTTCGG TGCGCAACGG
CTTGCTCGCG ACGGCCGGAC TCGTCGGGCC GGAAGGGTGG TGGCGTTCTA CGACACCGAT
GCCGGTCGAT ACCTGTTCCA AGTCGCCCCG GGCGGGGATG GACGTGACTG GGCGACGGTG
ACACCGGCCG ACAACGCGTT GCTCGCTCAG CGGGTGTGGG AGTTGCTCGA CGAGGTCTGA
 
Protein sequence
MVSTMPGGGV VLSTLEFDVL WEHLGLPQRH VALDVPSPGV TYTERARFVE QAWDSLAARG 
LVQGRETTVE LGDLLHLLAR PQLSVDVWVW TDRQISGLAA CTGQQAVLGV VDGDEVWLIP
ARDSALAASA VSVAGELGPG VGRSVSLPHD VLVAADAEAR GDAKALATAL EDRGVELWQA
QELAGMLFGT VTRGQFGAQR LARDGRTRRA GRVVAFYDTD AGRYLFQVAP GGDGRDWATV
TPADNALLAQ RVWELLDEV