Gene Svir_38000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38000 
Symbol 
ID8389121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4121321 
End bp4121557 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content62% 
IMG OID644977811 
Productphosphoribosylformylglycinamidine synthase, purS protein 
Protein accessionYP_003135571 
Protein GI257057739 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1828] Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 
TIGRFAM ID[TIGR00302] phosphoribosylformylglycinamidine synthase, purS protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0884199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGAG TAGTCGTCGA CGTCATGCCC AAACCCGAGA TCCTCGATCC CCAAGGCCAA 
GCGGTCGCCG GTGCGCTCGA TCGGCTCGGA TTCTCCGGGA TCACCGAAGT CCGTCAGGGC
AAGCATTTCG AGCTGGAGGT CGACGATAGC GTCGACGATG AGACGCTCGC CAAGATCGCG
GAAGGCTTCC TCGCCAACCC CGTGATCGAG GAGTGGACGA TTCGGAGGAT CGACTGA
 
Protein sequence
MARVVVDVMP KPEILDPQGQ AVAGALDRLG FSGITEVRQG KHFELEVDDS VDDETLAKIA 
EGFLANPVIE EWTIRRID