Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_37940 |
Symbol | |
ID | 8389115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4113617 |
End bp | 4114480 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644977805 |
Product | lysozyme M1 (1,4-beta-N-acetylmuramidase) |
Protein accession | YP_003135565 |
Protein GI | 257057733 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.530239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCG GACGGAGAAA GTGGCGTGCA GCCGCTGCCG TCATCGCCGG GTCGGTCAGC GCGCTCCTGC TCGGTGCGCT GGCTCCCGCG ACGGCTGACA CCGGCACGGA CGACATACGT ATCACCGGGC ATGGCCAAGA GTTGGGCTCG CAGATCAGGG CGGTCGAAGG CGACCACTCC AACTCTTTCA CGAAACGCCG AGCACTTGAA CCACAAGGCC TCAACTCCGA CGGTGCGAAG GCGTACGCCA CCGTCCCAGG CATCGATGTC AGCGGCTGGC AACAGAATGT CGATTGGGCT TATTGGTGGG GTCAGGGCAA ACGATTCGCC TACGTCAAGG CGACGGAAGG AACCAGCTAC AAGAATCCCT ACTTCGCGCA GCAGTACAAC GGTTCCTACA ACATCGGCAT GATCCGGGGG GCCTATCACT TCGCGCTTCC CAACGTGTCG TCCGGCGCAG CACAGGCCAA CTTCTTCGTC GACAACGGCG GTGGTTGGTC CGCTGACGGC AAGACACTGC CGGGCGTGAT CGACCTGGAG TACAACCCGT ACGGCGACAC GTGCTACGGC AAGACGCAGT CGCAGATGAC CGCCTGGATC CTCGACTTCC ACGACACCTA CCACGCCCGC ACGGGTCGCT GGCCGGTGAT CTACACGTCG ACGAGCTGGT GGAAGCAGTG CGTGGGCACC ACGGGCGACT TCTCCAGCAC CGCCCCGCTG TGGATCGCTC GCTACGCCTC GTCGGTGGGT GAGCTGCCGT ACAACTGGAG CTACCACACG TTCTGGCAGT ACACCTCCAC CCCGATCGAC CAGAACAGCT TCAACGGTTC CTACGAGCGG CTGCAGGTTC TCGCGACCGG CTGA
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Protein sequence | MGIGRRKWRA AAAVIAGSVS ALLLGALAPA TADTGTDDIR ITGHGQELGS QIRAVEGDHS NSFTKRRALE PQGLNSDGAK AYATVPGIDV SGWQQNVDWA YWWGQGKRFA YVKATEGTSY KNPYFAQQYN GSYNIGMIRG AYHFALPNVS SGAAQANFFV DNGGGWSADG KTLPGVIDLE YNPYGDTCYG KTQSQMTAWI LDFHDTYHAR TGRWPVIYTS TSWWKQCVGT TGDFSSTAPL WIARYASSVG ELPYNWSYHT FWQYTSTPID QNSFNGSYER LQVLATG
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