| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37840 |
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| Symbol | |
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| ID | 8389105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4104549 |
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| End bp | 4106132 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977795 |
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| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
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| Protein accession | YP_003135555 |
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| Protein GI | 257057723 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.183307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGGCA AGGGATCACT GGCGCGGCAG CTGCTCGGCT GGCACCTGTC GTTGGTGTTC
GCGCTGCTCG GCTGCGTCAC CGTGTACTCG GTGATCCAGT CCAACCACGA CTTCGTCACC
AACGAGGGGC GGGACCTGCT GTCGGTGGCG GAGAACGTGG CCGCCGTCCC GGGGGTTCGG
GAGAGTCTCT CCGACCCGGT GAACCGGGAC CCGCTGCCGA GTTTCGCCGA GAGCGCCCGT
AGCCTGTCCG GAGCCGACTT CGTCATCATC GCCGACCCGG ACCGGGTGGT GCTGACCTCG
CCGGACCCGG CGCAGCTTCG GACGCGACTG CCGCTCGGGG ACAGCACCGT GCCCCAGGGA
CGATCCTGGG TCGGCGAGGT GGACGGTTCG CTCGTCGCCC ACGTTCCCGT ACTCGATGAT
CGCGGGCAGA TGATCGGCAT CGTCGCCGCG GGCAAAGCCA CACCAGGTTT CCTCGAGGGC
CTGACGAACC GGCCCGGCGA CGCGCTCGCG CTACTCGGTA TCGCGCTCGT CCTCGGTGTC
ACCGGCTCCC TGTTGCTGGC GTGGCGGGTG AAACGACAGA CGCTCGGCCT GGAACCCCGG
GAGATCACCG GCTTGGTGGA GCACCGGGAA GCCCTCCTGC ACGGCATCAA GGAAGGTGTC
GTCGCGCTCG ATCAGCAGCA CCGCATCACC CTGGTGAACA AGCAAGCGCG GGAGCTTCTC
GCGCTGCCCG ACGACTGCGT GGGCACCGCC GTGGCTGATC TCGACGTCGG TGGCCGCCTA
CGCGACGTGC TCACCGGACA GTCCAGTGGC GACGACCAGA TCGTGCTGCG AGCGGGCCGG
GTGCTGGTGT TGAACCGGAT GCCGGTGTAC CGGGGTTCCC GCCGACTCGG CGCCGTGGTG
ACGTTGCGGG ACAGGACCGA GCTGACGACG TTGCGGGAGG AGCTGGCGGC CGCTTCGCGC
ACCACGGACA CCCTGCGCGC GCAGGCCCAC GAGTTCTCCA ACCGGATGCA CACCATCGCC
GGGCTCATCG AACTCGGTGA GTACGACGAG GCACGCAACT ACGTGAACCT CGTCAACCGA
GTCCACGGGC AGTGGCACGA CACCGTGAGC GCTCGCGTCC AGGACACCGC CGTGGCCGCG
TTGCTGATCG CCAAGGCGAG TCTCGCGGCC GAACAGGGGG TGGGACTGCG CCTGACCGAG
GACAGCCACC TGTCCGAAGT CGACGAGAGC CTGTCGACGG ACCTGGTGAC CGTGGTGGGC
AATCTCGTGG ACAACGCACT CGACGCGGTG CGCGGCGCAC CCGAGGCCTG GATCGAGATC
GACGTGCGCG AACGGGACGG CGCGGTGTCG GTGGTGGTCC GTGATTCGGG TCCGGGCGTG
GCACCCGAGA TCGCGACCGA GGTGTTCACC CACGGCTTCA CCACGAAAGC GGCCGAACAC
GGGGACAGTC GTGGCCTCGG CCTCGCGCTC ACCAGACAGG CGTGCCGTCG CAGGGGTGGC
CGGGTGGAAT TGCGCAATGA CGGTGGTGCG GTGTTCACAG CGGTCTTGCC GTACGGGAGG
ACACCGAAGA AGGTGTCACC GTGA
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| Protein sequence | MGGKGSLARQ LLGWHLSLVF ALLGCVTVYS VIQSNHDFVT NEGRDLLSVA ENVAAVPGVR
ESLSDPVNRD PLPSFAESAR SLSGADFVII ADPDRVVLTS PDPAQLRTRL PLGDSTVPQG
RSWVGEVDGS LVAHVPVLDD RGQMIGIVAA GKATPGFLEG LTNRPGDALA LLGIALVLGV
TGSLLLAWRV KRQTLGLEPR EITGLVEHRE ALLHGIKEGV VALDQQHRIT LVNKQARELL
ALPDDCVGTA VADLDVGGRL RDVLTGQSSG DDQIVLRAGR VLVLNRMPVY RGSRRLGAVV
TLRDRTELTT LREELAAASR TTDTLRAQAH EFSNRMHTIA GLIELGEYDE ARNYVNLVNR
VHGQWHDTVS ARVQDTAVAA LLIAKASLAA EQGVGLRLTE DSHLSEVDES LSTDLVTVVG
NLVDNALDAV RGAPEAWIEI DVRERDGAVS VVVRDSGPGV APEIATEVFT HGFTTKAAEH
GDSRGLGLAL TRQACRRRGG RVELRNDGGA VFTAVLPYGR TPKKVSP
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