| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37780 |
|---|
| Symbol | |
|---|
| ID | 8389099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 4098964 |
|---|
| End bp | 4099872 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644977789 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135549 |
|---|
| Protein GI | 257057717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.245305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCGAC CGTTCGCGGC CTATCTCAGG GTGTATGAAC CGCTGTCATC CTTCGGCGAT
CCACCAGATG ATGCGCTGCT CGCGGCGGTG GAGAGATCCG AACTCACGCC GGGTGAGGCG
ATCGCGCGCG AACAGTGGCT ATGGCTGAAA TCACAGGTCT CTTCCGCTCA CGCCCTGCCC
GCCGAGCTGC CCGACGGACG TCCTGGACCG AGTCTTCGCA CCGACGTGCT CGTGCTCGAC
CCCGGTGAGG TGCCGGTCAG TGACGACGCC ATCGACCTCG GTAGCGAGCC GCTCGTGTGC
CCGTTGGAGA TCCGGGTGAG GTCGGCCGCC GCGCTGTCCA GCTTCCTCGA CGACGCCCCT
CCCGCTCTCC AGACCGCCGT CCTCGAGGCG AACGGTCTCA CCGTCGAGGA GGTGAAGCAC
AGGTCGCATA GCGCGCTACG CGACCTGTAC GGGTCGACCA TGCACGTGTT GTCCACCAAC
TGGATCGTGC CGTTGCCGTG GTTCACGGTC GTCGACCCGG ACCAGCGCAG GATCGTGCTC
GGCTCGGGAC CGTCGGACCC GATCCGGGAG GTGTCGTGGC GGGTGGCGAT GGTCGACGCC
CGAGCGCGCA TCGCGGAGGC CGAGGAGCTG ATCACCGACG CGCTCGGCGA GGAGGCGGGG
CCGTCCCGAG TCCTCGCCGA GACCCACCGC TGGCTGAACA GCTTCCACCC CGACTCGGCC
GTCGAGCTCG ACTACGGTGG CCTGGTCCAA CTCATCGAGG ACCCGGTACT GGCCACCGAC
ACCACGGCCG ACGACGTGCA CGCCATCCTC GACGCGCTGC GCAGAGGCGC CCTCGAGGAG
GTCGTCGAGG CATTCGAGTC CCTGCGCGAC TACTGGGGCG ACCTGGCGTC GAGGGAGCGG
TTCAACTGA
|
|---|
| Protein sequence | MLRPFAAYLR VYEPLSSFGD PPDDALLAAV ERSELTPGEA IAREQWLWLK SQVSSAHALP
AELPDGRPGP SLRTDVLVLD PGEVPVSDDA IDLGSEPLVC PLEIRVRSAA ALSSFLDDAP
PALQTAVLEA NGLTVEEVKH RSHSALRDLY GSTMHVLSTN WIVPLPWFTV VDPDQRRIVL
GSGPSDPIRE VSWRVAMVDA RARIAEAEEL ITDALGEEAG PSRVLAETHR WLNSFHPDSA
VELDYGGLVQ LIEDPVLATD TTADDVHAIL DALRRGALEE VVEAFESLRD YWGDLASRER
FN
|
|---|
| |