| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37750 |
|---|
| Symbol | |
|---|
| ID | 8389096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 4096244 |
|---|
| End bp | 4097374 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977786 |
|---|
| Product | folate-binding protein YgfZ |
|---|
| Protein accession | YP_003135546 |
|---|
| Protein GI | 257057714 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.356305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTATG AGTCTCCGCT GCTGAGGCGT CCCGGCGTCG TCGCACCCCC CGAAGACCAC
CCCGAGGCGG GCGTGCCGTG GCATTGGGGT GATCCGTTCG CCGAGCAGCG CACGGCGAGC
CGTGGTGTCG CGGTCGTCGA CAGGTCGCAC AGGGAGATCA TCACGGTGAC GGGCGAGGAT
CGCCTGTCGT GGCTGCACCT GGTCATCTCG CAACACGTCA CCGAACTGCC GGAGGGCGAG
GGCACCGAAG CCCTGGTGCT GGACAGCCAC GGCCGTATCG ACGCGCACAT GGTCCTGGCG
TATGTGGACG GCACCGTCTA CCTCGACACC GACCCCGGTG CCCAGGCCAC GACGGCGTTG
CCCAAGGGCG GTGAGAAACA GCCGCTGCTG GACTACTTCG AGGCCATGAA GTTCTGGTCG
AAGGTCGACA TCCGCGACGC CACGGACGAG TGGGCGTTGC TGACCCTGCT CGGGCCCGAG
GTGTCCACCA TGCTCTCGCG GTTCGACATC GAACTCGACA CACGCCCGTA CGCCGTGACC
CGGTTCTCCG GTGGGATCGC ACGGCGGATG CCGTGGCCGG GACCCTCGAG TGTGGACCTG
CTGATCCCGC GTTCCGAACT GGTCGACTGG TGGACCAAAC TCACCGACGC CGGAGCGCGT
CCCGCCGGGA CATGGGCGTT CGACGCGCTG CGGGTGGAGT CGCTACGGCC GAAACTGGGC
GTCGACACCG ACGAACGCAC GATCCCGCAC GAGGTGAACT GGATCGGGTC GGCGGCTCAC
GTGGCCAAGG GTTGCTACCG CGGCCAGGAA ACCGTCGCCA AGGTGCACAA CGTGGGCAAA
CCGCCGCGCA ACATGGTGTT GCTGCACCTC GACGGCTCGC AGGAGATCTA CCCGGAGACG
GGCGATCCGG TGCTCCGCGG CGACCGCACC GTGGGCCGGG TCGGGAGCGT GGCCCAGCAC
CACGAACTCG GTCCCATCGC GCTCGCGCTG CTCAAACGTT CCACCCCGGC GGACGCCGAA
CTGCTGGCTG GGACCGAGGA CAGGGTCGTC CAGGCGTCGA TCGATCCCGA TTCACTGCCC
CGGGAGCACA CGGCCCCCGG ACGGGAGGCG GCGCGGCGGT TGCGGGGATG A
|
|---|
| Protein sequence | MAYESPLLRR PGVVAPPEDH PEAGVPWHWG DPFAEQRTAS RGVAVVDRSH REIITVTGED
RLSWLHLVIS QHVTELPEGE GTEALVLDSH GRIDAHMVLA YVDGTVYLDT DPGAQATTAL
PKGGEKQPLL DYFEAMKFWS KVDIRDATDE WALLTLLGPE VSTMLSRFDI ELDTRPYAVT
RFSGGIARRM PWPGPSSVDL LIPRSELVDW WTKLTDAGAR PAGTWAFDAL RVESLRPKLG
VDTDERTIPH EVNWIGSAAH VAKGCYRGQE TVAKVHNVGK PPRNMVLLHL DGSQEIYPET
GDPVLRGDRT VGRVGSVAQH HELGPIALAL LKRSTPADAE LLAGTEDRVV QASIDPDSLP
REHTAPGREA ARRLRG
|
|---|
| |