Gene Svir_37080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37080 
Symbol 
ID8389029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4032560 
End bp4033291 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID644977720 
ProductFe-S oxidoreductase 
Protein accessionYP_003135484 
Protein GI257057652 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.151092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0205493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAC CGCGCGTGGC GCTGTTCGCG ACCTGCCTCA CCGACACGCT GTATCCCGAC 
ACCGCCAAAG CCGTGGTCCG GCTGCTTGAA CGGCTCGGCT GCGAGGTCGA TTTCCCGCTG
GGCCAGACGT GCTGCGGGCA GATGCACTAC AACACCGGTT ACCACGACGA GGCCGCACCG
CTGGCCCGCC GCTACGCGGA GGTGTTCGAC GGCTACGACT ACGTGGTGGC CCCCTCCGGT
TCGTGCGTGG GCATGGTCCG CGAGTTCCAT CCCGGTCTGT GCGGGACCAG TCCCGCCGTC
GAACGCACCT ACGAACTCAG CGAGTTCATT GTGGACATCC TCGGGGTCAC CGACGTCGGT
GCGTACTTTC CGCACCGGGT GACCTACCAC CCCACCTGCC ACTCGCTTCG CCTGCTCGGC
GTGGGCGACA AGCCGTTGCG CCTGCTGCGC GAGGTGAAGG GTCTCCAGCT GGTCGAGTTA
CCGCAGGCGG AACAGTGCTG CGGTTTCGGC GGCACGTTCG CGTTGAAGAA CGCGGAGACG
TCCACCGCCA TGCTGGCCGA CAAGATGCGC TGCGTGCAGG ACACGGGCGC ACAGGTGCTC
ACCGCGGGCG ACAACTCGTG TCTGATGCAC ATTGGTGGTG GTCTGTCCCG ACTGCGCACC
GGCGTGCGAA GCGTGCACCT GGCGGAGATC CTGGCGAGTA CGGAGGAGCA GCCGTGGGTC
GCAACCCCGT GA
 
Protein sequence
MTTPRVALFA TCLTDTLYPD TAKAVVRLLE RLGCEVDFPL GQTCCGQMHY NTGYHDEAAP 
LARRYAEVFD GYDYVVAPSG SCVGMVREFH PGLCGTSPAV ERTYELSEFI VDILGVTDVG
AYFPHRVTYH PTCHSLRLLG VGDKPLRLLR EVKGLQLVEL PQAEQCCGFG GTFALKNAET
STAMLADKMR CVQDTGAQVL TAGDNSCLMH IGGGLSRLRT GVRSVHLAEI LASTEEQPWV
ATP