Gene Svir_36880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36880 
Symbol 
ID8389009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4012134 
End bp4012577 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content73% 
IMG OID644977700 
ProducttRNA-adenosine deaminase 
Protein accessionYP_003135464 
Protein GI257057632 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.699352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0665453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCGG TGCGCGTCGC CCTCGGCTTC GCCGAGCGCG CCGTCGGGAC GGCGGACGTC 
CCCATCGGCG CCGCGGTGTT CTCCCCGGAC GGAAGGCTGT TGGCCGGCGC ACACAACGCC
CGGGAACGGT TGGGGGACCC CACCGCGCAC GCCGAGGTGC TGGCGCTACG GGAGGCCGCG
CGCGTGCACG GTGACGGCTG GCGGCTGGAA GGGTGCACGC TGGCGGTGAC GGTGGAGCCG
TGCACGATGT GCGCGGGCGC GCTCGTGCTG GCCCGGGTGG CGCGGGTGGT GTTCGGGGCG
TGGGAGCCGA GGACGGGTGC GGTCTGTTCG CTGTGGGATG TGGTGCGGGA CCGCAGGCTC
AACCACCGTC CCGAGGTCGT CGGAGGGGTG CTGGAGTCGG AGTGTGCGGC GCTGCTGAAC
GACTTCTTCG CTGATCAGCG CTAA
 
Protein sequence
MDAVRVALGF AERAVGTADV PIGAAVFSPD GRLLAGAHNA RERLGDPTAH AEVLALREAA 
RVHGDGWRLE GCTLAVTVEP CTMCAGALVL ARVARVVFGA WEPRTGAVCS LWDVVRDRRL
NHRPEVVGGV LESECAALLN DFFADQR