| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36720 |
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| Symbol | |
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| ID | 8388993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3991411 |
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| End bp | 3993255 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977684 |
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| Product | transketolase |
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| Protein accession | YP_003135450 |
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| Protein GI | 257057618 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.148891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.641961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAG CTGCGGTTGA TCACGACCTG TTCGTGGAGC TGGGCAGGCA GCTGCGGGTG
GACGCGATCC GCGCCGCGGA TTTCGCCGGT TCGGGCCATC CCACGTCGTC GATGTCGGCG
GCCGACCTCA TGGCCGTGCT GTTGGCGAGG CACCTGCGCT ACGACTTCGA GGCCTCCCGG
AATCCGGCCA ACGACCATTT GATCTTCTCC AAGGGGCACG CCTCCCCGCT GCTGTACGCC
ATGTACGTGG CGGCGGGCGC CGTGTCCCCG GAGGAGCTGC GCTGGTACCG GTCCTCGGGC
AGTCGACTGC AGGGACACCC CACACCGGCA CTACCGTGGG TCGACGCGGC CACCGGAGCA
CTCGGGCAGG GGTTGGGCAT CGGCGCCGGG ATCGCGCTCG CGGGCCAGCG TCTTGACCAT
CGCGACTTCC ACGTCTGGGT TCTCTGCGGG GACGGTGAGC TCGCCGAGGG GTCGATGTGG
GAGGCGTTCG AACACGCCGG ATACGAGCGG TTGCACAACC TCATCGCGAT CATCGACGTC
AACCGCCTCG GTCAGCGCGG CCCCACCCGG CACGGTTGGG ACACCGCCGC CTACGCGCGG
CGCATCGGCG CGTTCGGCTG GCACACCATC GAGATCGACG GTCACGACGT CGACCAGATC
GACGCCGCCT ACGCCGAGGC CAAGGACAGT AACCTCCCCA CCGCGATCCT CGCCCGGACC
CGCAAGGGCA AGGGGGTTCG TGAGGTGGAG AACGCCGAGG GCGCCCACGG CAAGCCGGTG
CCGGACGCGG AGGAGGCGGT GGCCGAACTC GGCGGTCCCG GGTCCGTCCG GGTGGAGGTG
GCCAGCCCTG AATACGAGGC TCCCCGGCAT CCCGATCTGC ATTCGCTGTC CATCCCCACG
TATGAACGTG ACGGGAGGAA GGTGGCCACG CGCACGGCGT TCGGACAGGC CCTGGCCATG
CTGGGACACG CCCGCTCCGA CCTGGTGGTC CTCGACGCCG ACGTGAGCGA CTCCACGCGC
ACCTCCTACT TCGCGCGAGA GCATCCCGAC CGGTTCTTCG AGTGCTACAT CGCCGAACAG
CAGATGACGG CCACGGCCGT GGGGATGTCG GTGCGGGGGT GGTTGCCGTT CGCGGCCACG
TTCGCGGCGT TTTGGAGTCG GGCCTTCGAC TTCGTGCGCA TGGCCTCGAT CGGCGGGGCC
GACCTGTGCC TGGCCGGTTC GCACGCCGGA GTGTCGATCG GTCCGGACGG TCCCTCCCAG
ATGGGATTGG AGGACCTGGC CGCGTTCCGC GCCCTGTGGC GCAGCACGGT GCTCTACCCC
TGTGACGCCA ACCAGACCGT GCATCTGACC GCGGCGATGG CCGAGCACTC CGGCATCCGT
TACTTGCGGA CGACGCGGGA GGATTTGCCC GTGTTGTACG GACCCGAGGA GACCTTCTCC
GTGGGAGGCA GCAAGGTGCT GCGGCGGTCC GACGCCGACG ACGTCACGAT CGTGGCCGCG
GGCATCACCG TGCACGAGGC GTTGCGGGCC GCGGACGTGC TCGCCGATTC GGGCATCCGG
GCCAGGGTGG TGGACCTGTA CTCGATCAAA CCCGTCGACG TCGCCACCCT ACGCGCGGCG
GCGGCCGACA CCGGACGCAT CGTCACCGTG GAGGACCACT GGCCGCAGGG AGGACTCGGT
GACGCGGTGC TCGACGCGTT CACCGGGGCC ACGGCGATGC CGGCGGTGAT CAAGCTCGGT
GTGCTCGCCC TACCGGGTTC GGCCACGCCC ACCGAGCAGT TGCAGCACGC CGGGATCGAC
GCCGATTCCG TGGTGGAGGC GGCACAGGAA CTGATGGCGG TGTGA
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| Protein sequence | MAVAAVDHDL FVELGRQLRV DAIRAADFAG SGHPTSSMSA ADLMAVLLAR HLRYDFEASR
NPANDHLIFS KGHASPLLYA MYVAAGAVSP EELRWYRSSG SRLQGHPTPA LPWVDAATGA
LGQGLGIGAG IALAGQRLDH RDFHVWVLCG DGELAEGSMW EAFEHAGYER LHNLIAIIDV
NRLGQRGPTR HGWDTAAYAR RIGAFGWHTI EIDGHDVDQI DAAYAEAKDS NLPTAILART
RKGKGVREVE NAEGAHGKPV PDAEEAVAEL GGPGSVRVEV ASPEYEAPRH PDLHSLSIPT
YERDGRKVAT RTAFGQALAM LGHARSDLVV LDADVSDSTR TSYFAREHPD RFFECYIAEQ
QMTATAVGMS VRGWLPFAAT FAAFWSRAFD FVRMASIGGA DLCLAGSHAG VSIGPDGPSQ
MGLEDLAAFR ALWRSTVLYP CDANQTVHLT AAMAEHSGIR YLRTTREDLP VLYGPEETFS
VGGSKVLRRS DADDVTIVAA GITVHEALRA ADVLADSGIR ARVVDLYSIK PVDVATLRAA
AADTGRIVTV EDHWPQGGLG DAVLDAFTGA TAMPAVIKLG VLALPGSATP TEQLQHAGID
ADSVVEAAQE LMAV
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