Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_36540 |
Symbol | |
ID | 8388975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3976242 |
End bp | 3976841 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644977667 |
Product | uridine kinase |
Protein accession | YP_003135433 |
Protein GI | 257057601 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.36252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCTCTG ACCTCGCTTC GGGGTACGAA CCGCGTCACG TACCGGTGGA CGGTGTCGCT GACGCGGTGC TGGCGGCGCC CCCTCGGTTG GGCGCGGTGC GGTTGGTGGC CGTCGACGGC CCGTCCGGGT CGGGTAAGTC GACCTTCGCG CGGGAATTGA CCGCGACACT GCGGGACCGT GGGGTCCGTA CCGAGCTGAT CAGCACGGAC GACTTCGCCA CCTGGGACGA TCCCGTGTCG TGGTGGCCGA GGTTGGCCGA GGTGCTCGAC CGGATCGCCG CCGGACTGCC CGGCCGTTAC CGCGCATGGG ACTGGTCGAC CGGTCGACCA CGGCCCGGCG CCGAGGTGCG GGTCGCGGTG CCGGAGGTGC TCGTGGTGGA GGGGGTGTCG GCGGGACGGG CCTCGGTGCG GCCCAGGCTG TCGCGACTGT GCTGGGTCGA GGTGCCGTGC CCCGAGGAAC GGTTGAGACG GGCGGTGGCC CGCGACGGCG AAGCCTCCAG GCCGATGCTC GAAGCGTGGC AACGGTTCGA ACGTGGCTGG TTCGCGGTGG ACCAGACCAA GCGTCATGCC GACGACGTCA TCCTCCCCGC TGACGTGTGA
|
Protein sequence | MPSDLASGYE PRHVPVDGVA DAVLAAPPRL GAVRLVAVDG PSGSGKSTFA RELTATLRDR GVRTELISTD DFATWDDPVS WWPRLAEVLD RIAAGLPGRY RAWDWSTGRP RPGAEVRVAV PEVLVVEGVS AGRASVRPRL SRLCWVEVPC PEERLRRAVA RDGEASRPML EAWQRFERGW FAVDQTKRHA DDVILPADV
|
| |