Gene Svir_36540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36540 
Symbol 
ID8388975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3976242 
End bp3976841 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content71% 
IMG OID644977667 
Producturidine kinase 
Protein accessionYP_003135433 
Protein GI257057601 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.36252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTCTG ACCTCGCTTC GGGGTACGAA CCGCGTCACG TACCGGTGGA CGGTGTCGCT 
GACGCGGTGC TGGCGGCGCC CCCTCGGTTG GGCGCGGTGC GGTTGGTGGC CGTCGACGGC
CCGTCCGGGT CGGGTAAGTC GACCTTCGCG CGGGAATTGA CCGCGACACT GCGGGACCGT
GGGGTCCGTA CCGAGCTGAT CAGCACGGAC GACTTCGCCA CCTGGGACGA TCCCGTGTCG
TGGTGGCCGA GGTTGGCCGA GGTGCTCGAC CGGATCGCCG CCGGACTGCC CGGCCGTTAC
CGCGCATGGG ACTGGTCGAC CGGTCGACCA CGGCCCGGCG CCGAGGTGCG GGTCGCGGTG
CCGGAGGTGC TCGTGGTGGA GGGGGTGTCG GCGGGACGGG CCTCGGTGCG GCCCAGGCTG
TCGCGACTGT GCTGGGTCGA GGTGCCGTGC CCCGAGGAAC GGTTGAGACG GGCGGTGGCC
CGCGACGGCG AAGCCTCCAG GCCGATGCTC GAAGCGTGGC AACGGTTCGA ACGTGGCTGG
TTCGCGGTGG ACCAGACCAA GCGTCATGCC GACGACGTCA TCCTCCCCGC TGACGTGTGA
 
Protein sequence
MPSDLASGYE PRHVPVDGVA DAVLAAPPRL GAVRLVAVDG PSGSGKSTFA RELTATLRDR 
GVRTELISTD DFATWDDPVS WWPRLAEVLD RIAAGLPGRY RAWDWSTGRP RPGAEVRVAV
PEVLVVEGVS AGRASVRPRL SRLCWVEVPC PEERLRRAVA RDGEASRPML EAWQRFERGW
FAVDQTKRHA DDVILPADV