Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_36490 |
Symbol | |
ID | 8388970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3970103 |
End bp | 3971185 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977662 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein |
Protein accession | YP_003135428 |
Protein GI | 257057596 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.384991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.757279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG AAGCCGCACG GGCCGACCAC GCGGACGCGG CCGAACAGAA ACTGCTGGTC CTCGACGACG TCAAGGTGCA TTTCCCGATC AAACGGGGGC TCCTGTTCGA CCGCACCGTC GGTCACGTCT ACGCCGTGGA CGGTGTGAGC CTGCACGTGA ACCGGGGTGA GACGTACGGA CTCGTCGGCG AGTCCGGTTG CGGTAAGACC ACGCTCGGCC GGGCGTTGCT GCGGCTCATC GAACCCACCG GGGGCACTAT CACCTTCGAC GGGATCGACC TGTCCTCGTT GCGGGGCGAG AAGCTGCGCA CCATGCGCAA GCGGATGCAG ATGGTGTTTC AGGACCCACT GTCGAGCCTC GACCCACGCC AGTCGGTGGA GTCGTTGCTG GCGGAGGGGA TGCGGGCCCA CGGACTCGCC ACCGATCCGG AGCGCACACG GGCCAGGCTC AAGGAACTGT TGTCGGCGGT CGGGCTCCCC GCGAACGCGC TGCGGAAGTA CCCGCACGAG TTCTCCGGGG GCCAGCGGCA GCGCATCGGC ATCGCCAGGG CGTTGGCGTT GCAGCCGGAC CTGATCGTGG CCGACGAGCC GGTGTCGGCG CTGGACGTGT CGGTGCAGGC ACAGGTGATC AACCTGTTGG AGGACCTGCA GAACGAGTTC GGGCTCACCT ACGTGGTGAT CGCCCACGAC CTGGCCGTGG TGCGGCACAT CTCCGACCGG ATCGGCGTGA TGTACCTGGG GACGCTCGTG GAGGAATCCG ATGCGGACTC CCTCTACGAG CAGCCGCTGC ACCCGTACAC GAAGGCGCTG CTGTCGGCGA TCCCGGTGCC CGATCCGGTC GTGGAGGACC GGCGTGAGCA GATCCTGCTC TCCGGCGATT TACCCTCCCC GGCCGATCCG CCCAGCGGGT GCCGTTTCCA CACGCGTTGC CCGTGGCGGC AGGAGACGCT GTGCGACACC GAGCGGCCTG CGCTGCGCGA CGTGGGCAAC GGTCACCGGG TGGCCTGCCA CTACGCCGAG GACATCCTCG CGGGGCGCGT GTCGCCGCGG TCGGAGCCGG CGGAGGAGCC GGTGTCGGCC TGA
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Protein sequence | MTDEAARADH ADAAEQKLLV LDDVKVHFPI KRGLLFDRTV GHVYAVDGVS LHVNRGETYG LVGESGCGKT TLGRALLRLI EPTGGTITFD GIDLSSLRGE KLRTMRKRMQ MVFQDPLSSL DPRQSVESLL AEGMRAHGLA TDPERTRARL KELLSAVGLP ANALRKYPHE FSGGQRQRIG IARALALQPD LIVADEPVSA LDVSVQAQVI NLLEDLQNEF GLTYVVIAHD LAVVRHISDR IGVMYLGTLV EESDADSLYE QPLHPYTKAL LSAIPVPDPV VEDRREQILL SGDLPSPADP PSGCRFHTRC PWRQETLCDT ERPALRDVGN GHRVACHYAE DILAGRVSPR SEPAEEPVSA
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