Gene Svir_36090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36090 
Symbol 
ID8388930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3934003 
End bp3934692 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID644977624 
ProductADP-ribose pyrophosphatase 
Protein accessionYP_003135391 
Protein GI257057559 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.453332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.430111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGAC CCTTGACGAC ACCCAGCGAG GTGCCGGAGT GGTTGCGTCC CCTGGTCGAA 
TCCAGCGCGA AGGTGGATTC GACCGCGTTC ACCCGGGTCA CCCCGCCCCC GTATGACGCC
CGACGGGCGG CGGTGCTGAT GCTGTTCGGC ATCGGGGAAC ACGGTCCGGA CGTGCTGCTG
CTCCGCCGGG CCGACACGCT CGGCTCCCAC GCGGGCCAGG TGGCCTTCCC CGGTGGCGGG
GCCGAGGAGG GCGAGGACCC GGTGGCCACG GCGTTACGGG AGGCCGAGGA GGAGACCGGG
GTACTGCCCG AGGGGATTCA CCCCGTCGCG GTGTTCCCCG AGCTGTACGT TCCCGTGTCA
CGGTTCGCGG TGACACCCGT GCTGGCTCAT TGGCACCAGC CGTCTCCCGT CCGCCCCGTC
GACCCCGCGG AGACGGCCGC TGTGGCACGG GTGCCGATCG CGGAGCTCGC CGACCCCGCC
AACCGGTTCC TGGTCGCCCG GCGGGGTGGA GGATGGCGTG GACCCGCCTT CACCGTTCGA
GGGTTGTTCG TGTGGGGATT CACGGCCGGT GTGCTGGCGA CATTACTGGA GCTGGGTGGT
TGGGCCAGGG AGTGGGACCG CACGGACGTG CGCGACCTTG ACGTAGCGTT GGCCGAGCAC
GAGGCACGCA CCGCGACCGG ACGGACCTGA
 
Protein sequence
MSGPLTTPSE VPEWLRPLVE SSAKVDSTAF TRVTPPPYDA RRAAVLMLFG IGEHGPDVLL 
LRRADTLGSH AGQVAFPGGG AEEGEDPVAT ALREAEEETG VLPEGIHPVA VFPELYVPVS
RFAVTPVLAH WHQPSPVRPV DPAETAAVAR VPIAELADPA NRFLVARRGG GWRGPAFTVR
GLFVWGFTAG VLATLLELGG WAREWDRTDV RDLDVALAEH EARTATGRT