Gene Svir_36070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36070 
Symbol 
ID8388928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3931838 
End bp3932779 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content70% 
IMG OID644977622 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003135389 
Protein GI257057557 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.338915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.660761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGCACG TGCCTGCTCC CGATCCGTCG ACCGTGCGTC TGGAGGGTCC CTGGACACAT 
CGCGATGTGT CCGCGAACGG CATCCGGCTG CACGTCGCCG AACTCGGAAC CGGTCCGCTG
GTGTTACTGC TACACGGGTT CGCGGGGTTC TGGTGGGCGT GGCACCACCA GCTACGCACC
CTGGCGGACG CCGGGTTCCG CGTGGTCGCC GCCGATCTGC GAGGCTATGG CGACTCCGAC
AAACCGCCCC GAGGCTATGA CGGCTGGACG CTCGCCGGTG ACGTCGCAGG GCTCGTGCGT
GCGCTCGGAG AGCGCAAAGC CCACCTCGTC GGACACGCCT GGGGCGGTTT ACTCGCGTGG
TCGGTGGCCG CGCTGCATCC GCGCGTGGTG GCGTCCGTCA GTGTGCTCGG TGGGGCTCAC
CCCCTCGCCC TGCGAGCGGC GATCGGGCAC AGCTGGTGGC GATGGCGAGG CCAGGCGAGC
GCGATGCGGC ATCTGTTCCG TTTCCAGGTG CCGATGGTGC CCGAACGCAA GCTCGTGGCG
GCCGACGCCG CCGAAGTGGA GCGACTGCTG CGGGCGTGGT CGGGAGAGGA GTGGCGTCGG
CGTCCGGATT TCCCCGAGAC GGCACGCCGG TTCCGGCAGG CCATGCGGGT GCCCGGGGTG
GCCCACAGCG CGTTGGAGTA CTACCGGTGG GCGTTTCGGT CGCAGTTCCG TGGTGACGGA
CGCCGATTCG CCGAAGCGGT CGCCGACAGG GTGTCGATGC CGGTGCTGCA GATCCACGGC
GCGGAAGATC CGTGCGTGTT GCCGAGCACC GCGCAGGACT CGGCACCGTG GCGGGGCCCC
GACTCCCGAC TCGAACTGTT GAGCGGGATC GGACACTTCC CCCACCTGGA GGCGCCGGAG
CACACCGGCA AACTGCTCGC CGGATTCCTC CACGGAACCT GA
 
Protein sequence
MLHVPAPDPS TVRLEGPWTH RDVSANGIRL HVAELGTGPL VLLLHGFAGF WWAWHHQLRT 
LADAGFRVVA ADLRGYGDSD KPPRGYDGWT LAGDVAGLVR ALGERKAHLV GHAWGGLLAW
SVAALHPRVV ASVSVLGGAH PLALRAAIGH SWWRWRGQAS AMRHLFRFQV PMVPERKLVA
ADAAEVERLL RAWSGEEWRR RPDFPETARR FRQAMRVPGV AHSALEYYRW AFRSQFRGDG
RRFAEAVADR VSMPVLQIHG AEDPCVLPST AQDSAPWRGP DSRLELLSGI GHFPHLEAPE
HTGKLLAGFL HGT