Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_36030 |
Symbol | |
ID | 8388924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3928574 |
End bp | 3929338 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977618 |
Product | Ykud domain-containing protein |
Protein accession | YP_003135385 |
Protein GI | 257057553 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.247142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGGCGC TCGCGGCCGT CGCGACGCTG ACATTATTGG TCTCCGCTTG CGGTGGGGAC ACGGAGAAAC AAGCAGAAGC CGCCGAAGGA CAGTCGCAGC AGCAGATCGC CTCCCTCCCG GAGGCGACCA CGTACGGGAA GATCCCGGAC GCCCCCATGG ACCCGGAGCC GAACGCTCCG ACCGAGGGGG AGGTTCTACA CCCCACCCGA GAGCTGACGG TGCACGACGC GGTCGACGGC AAGCCGATCG CCCGTCTTCC CGTCAAGCAG ATCTCGTCCC CGACGTGGGT TCCCGTCATC GCTCGAGACG GTGACTGGGC ACAGATCCTG CTGCCCACCC GGCCCAACGG CGCGACCGGA TGGATCAACA CGTCGGGCGA TGCGGTCGAG TCAGCCGAGA ACGACTACCT CGTCAATGTC GACCTCGACT CGTTCCACCT GGAAATCCTC AAGAACGGCG AGCGGATCGG CGAGTGGACC GTCGGCATCG GAAAACCCGA GTCCCCGACA CCGACGGGGC GGGCGTACAT CATCGCCTCC ATCAAGGAGA CCGTGAACGA CTACAGCCCG ATCGTTCTCC CGCTGAGCTA TCACTCCGAC TCGCACGAAA CCTACGGCGG TGGTCCAGGC ACCGTCGGCA TCCACACCTG GCCGGACAAC AGCTTCGTTG GCAAGGCCAA CAGCGATGGA TGCATCCGGG TGACCAAGGA CGCTCTCGAG GCGCTCACCC AACTCCCGCT CGGGACGATC GTCAACATCG TCTGA
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Protein sequence | MLALAAVATL TLLVSACGGD TEKQAEAAEG QSQQQIASLP EATTYGKIPD APMDPEPNAP TEGEVLHPTR ELTVHDAVDG KPIARLPVKQ ISSPTWVPVI ARDGDWAQIL LPTRPNGATG WINTSGDAVE SAENDYLVNV DLDSFHLEIL KNGERIGEWT VGIGKPESPT PTGRAYIIAS IKETVNDYSP IVLPLSYHSD SHETYGGGPG TVGIHTWPDN SFVGKANSDG CIRVTKDALE ALTQLPLGTI VNIV
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