| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35920 |
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| Symbol | |
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| ID | 8388913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3913057 |
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| End bp | 3914244 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977607 |
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| Product | Flp pilus assembly protein, ATPase CpaF |
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| Protein accession | YP_003135374 |
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| Protein GI | 257057542 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.174355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG ATCTCGTCGA TCGGGTCAGG GCCAGACTCG CCGGTACGGA CGCCGCCACG
GACCCACGGG CGGTGGCCGA TGCGGTGCGC GCCGAAGCGG GTGGCGTCGC GGGCCATCTC
GACGTGCTCG CCGCGTTGAA GCTGTTGGAC GACGAACTGG CCGGGGTGGG GCCGTTGGAG
AAGCTCCTGG CGACTCCCGA GATCACCGAC ATCCTCGTCA CGGGGCCGGA CGAGGTATGG
GTGGACGGGC CCGACGGTCT TCACCGGACC GATGTCCGGT TCGAGGGCGA GGACGCCGTG
CGCAGACTCG CCCAGCGGTT GGCGCTCGCC GCGGGACGGC GACTCGATGA CGCACAGCCT
TTCGTGGACG GATGGTTGCC GGGCAGCGGA CCGGGAGGGC GTATTCGGCT GCATGCCGTA
CTACCGCCGA TCTCGGCCGA CGGCACATGC CTGTCTCTAC GCGTATTGCG TCCCGCCACG
CACGACCTGC GTTCCCTGCG TCGGCTCGGC ACGGTGGACG ACGCCGGTTT GGCACTGCTC
GAAGCCCTCG TGAAGGCACG GTTGGCGTTC CTCGTGTCCG GGGCGACGGG GTCCGGTAAG
AGCACGCTGC TGGGCGCGCT TTTGGGAGCC GTCGATCCCG CCGAGCGAGT GGTCTGCGTT
GAGGACGTCG GTGAGTTGCA GCCCGACCAT CCCCAGTTCG TCCGGCTGGT GGCGCGCCCA
CCCAACGTGG AGGGAGCGGG TGAGGTCACG CTCCGGGAGC TGGTGCGGCA GGCACTCCGG
ATGCGGCCTG ATCGACTCGT GGTCGGAGAG GTGCGGGGAC GCGAGGTCGT GGAACTGTTG
ACTGCGTTGA ACACGGGGCA TGACGGCGGT GCGGGCACGC TGCACGCCAA CGCACCCGCC
GAAGTACCCG CACGGCTCGA AGCGCTCGCA GCGCTCGGGG GGCTCTCCCG GGAGGCACTG
CACAGTCAGC TCGCCGCTGC GGTCCAGGTC GTGCTGCACA TGCGCCGAGA ACCGTCGGGG
CGCAGGGTGC TCGCCGAGAT CGGCCTGGTG CGTCGTCGCG GCGATGTTGT GAGCGTTGAA
CCCGCATGGC GTCCGGGTGA GCGATTGACC CGCGATTCAC CGCTCACCTT GGCGCTGCTT
TCACGACGGG ACACCCGAAC ACCAAGCGGC GGGGTGGCGT CGTGCTGA
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| Protein sequence | MSADLVDRVR ARLAGTDAAT DPRAVADAVR AEAGGVAGHL DVLAALKLLD DELAGVGPLE
KLLATPEITD ILVTGPDEVW VDGPDGLHRT DVRFEGEDAV RRLAQRLALA AGRRLDDAQP
FVDGWLPGSG PGGRIRLHAV LPPISADGTC LSLRVLRPAT HDLRSLRRLG TVDDAGLALL
EALVKARLAF LVSGATGSGK STLLGALLGA VDPAERVVCV EDVGELQPDH PQFVRLVARP
PNVEGAGEVT LRELVRQALR MRPDRLVVGE VRGREVVELL TALNTGHDGG AGTLHANAPA
EVPARLEALA ALGGLSREAL HSQLAAAVQV VLHMRREPSG RRVLAEIGLV RRRGDVVSVE
PAWRPGERLT RDSPLTLALL SRRDTRTPSG GVASC
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