| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35900 |
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| Symbol | |
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| ID | 8388911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3911580 |
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| End bp | 3912218 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977605 |
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| Product | Flp pilus assembly protein TadC |
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| Protein accession | YP_003135372 |
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| Protein GI | 257057540 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.630177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.312815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA CGATGAGCAT CGCCGTGCTC GTCGCGACGG CGGTACTGCT GCTGCCCTCG
AGGGCCTCCG CTCGTCTGCG GGACGTGCTG CGGACAGCTC CGTCGGTTCG GCCCCGGTCC
GCTGTCGGGG TCATGCGATT GCGCCTGCCG CGGCGGACGT CGTCACACGG TGATGCGGTC
GGTGATTCGC CCGGGTGTTC GGCCGCGGAC ACGGCATTTC TCGCGGATCT GTTGGGGGCT
TGCCTGATCG CCGGTCTGCC GGTGCCGACG GCGGTGTCGA CGGTCGCCGA CGTGGCTACC
GGCCCGGTCG CCGAGGTGCT CCGATCCACG GGTAATGCGC TCGCGCTCGG CGCGAGCGCC
GAATCCGCGT GGCAACACGC CCGGAACCAT CCCGACACGG CTGAACTCGC TCGTGCGGCG
TGCCGGACCG CCTCGTCCGG CAGTGCGTTG GCCGCGCAGG CCTTCGCGCT CGCCGAGCGC
ATCAGGAATG CCGCGACAGA CCGTGTCGAA GCACGGGCGC AGCGGGCGAG CGTGCTGGTC
GCCGGCCCAC TAGGGCTGTG TTTTCTCCCG GCTTTCTTAT GTCTGGGGGT GATTCCGGTC
GTCCTCGGTC TCGCCGACCA CCTCACCGTC ACGCCGTGA
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| Protein sequence | MSNTMSIAVL VATAVLLLPS RASARLRDVL RTAPSVRPRS AVGVMRLRLP RRTSSHGDAV
GDSPGCSAAD TAFLADLLGA CLIAGLPVPT AVSTVADVAT GPVAEVLRST GNALALGASA
ESAWQHARNH PDTAELARAA CRTASSGSAL AAQAFALAER IRNAATDRVE ARAQRASVLV
AGPLGLCFLP AFLCLGVIPV VLGLADHLTV TP
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