Gene Svir_35850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_35850 
Symbol 
ID8388906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3909559 
End bp3910221 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID644977600 
Producthypothetical protein 
Protein accessionYP_003135367 
Protein GI257057535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.109111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.177404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACA CCCAATGGCC GAATAGCTGG CGTGCTGCCT TCCGTATCGA GCTGCGGGCC 
GAGGCGATCG GTCTCGCGTG GCGTGGTTGG CCGGTGATTC CGGGAACCTA TCCGGACAGC
GATGCCGATA CCGCCCATGC GGGCGGAGTC ACCCAGACGC GTGACTCCGC CGAGTGGACC
GGTCCCGTCC CCGTCCACAG TGATTGGGAA CGTCGTCTCG GTGCCCACCC GCAACAGGTG
GCAGCGTGGT GGACCGGCAA ACCGTACAGC CTCCTCGTCG CCACCGGTAC CGTCGTAGAC
GCCGTCGAGG TCGACGACAA CCTCGGCCGC CGTGCCGCCA TGCTGTTGCG GGCCACGGGT
CGACCCGCGC CCATCGTCGC CATGCCGAAC GGGCGTTGGC TGTTCCTCAC CTCGAGTTCC
GAGAGCTTCC CCTCAACTTT GTCCGAAGTG GAAGGGATCA GACGACACGG AAAGGGTGGC
TGGATCCCAC TTCCGCCGAC GCCGTTCGAA CACGGCGTCG TGCACTGGAG GGTCAAGCCC
GATGTCTGGG GCTGGAAGCT GCCCCAAGCC GACATCGTGC ACGACGTTCT CATGCGTGCG
TTGCGCAGTG AGTCCCAGGT GGACACTCAA CGCGAGTTGT CCACCTGGTC GTCGGCGGCC
TGA
 
Protein sequence
MLDTQWPNSW RAAFRIELRA EAIGLAWRGW PVIPGTYPDS DADTAHAGGV TQTRDSAEWT 
GPVPVHSDWE RRLGAHPQQV AAWWTGKPYS LLVATGTVVD AVEVDDNLGR RAAMLLRATG
RPAPIVAMPN GRWLFLTSSS ESFPSTLSEV EGIRRHGKGG WIPLPPTPFE HGVVHWRVKP
DVWGWKLPQA DIVHDVLMRA LRSESQVDTQ RELSTWSSAA