| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35730 |
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| Symbol | |
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| ID | 8388894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3891035 |
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| End bp | 3892588 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644977588 |
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| Product | D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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| Protein accession | YP_003135356 |
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| Protein GI | 257057524 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.325775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.555168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTATCG AGCCGCGGTC CGGGGGCACC GGGGAACAGC AGGCCGTCGT GGCGCAGGCG
GAGACCGAGA CACCGGAGCA GCCGAGCCCG CCCGTCGAGG GGCCGCCGCC CGGGGAATCC
CCGCCCGGCG CGACGCCTCC GCCGGAGGAA GGGGAGGCCG CGCCGCGTCC CCGTCGTCGT
CCGGTGGTCG TCGCGGCGGT GTTCGTGGTG GTGCTGTTGG TCGCGGGTGG GGTGTTGGCG
GTGCCCTATG TGTCCAATCG GCTCGGTCTG CCGTGGGCAC CCAACGCGCC GAAGGCTGAT
CCGCCCGCGC CGAGGGAGAT CACGTTGGCT CTCCAGGTGC CGCCGGAATC GGCTCCCACG
CCCACGCCCG CGGGGGTCGG TGCCGCCATC GACGACCTGG TGACCGATCC CGCGCTCGGG
ACGCTCCTAG GCAGCGTCGT CGATCCGGCC ACCGGCACGA CGCTGTGGGA ACGCAACGCC
GACCAGGCCT TGGCCCCCGC GTCGACGACG AAATTGCTGA CATCCGCCGC CGCTCTGCTC
GTGCTCGACC ACGACATGCG TTTCCCCACG AAGGTCGTGG CGGGGGCGGA GCCGGGCACG
GTGGTGTTGG TCGGCGGTGG TGACGTCACC TTGTCGTCCC TGCCGGAAGG GGAGGAGTCG
ATCTTTCCCG GCGCGGCGCA CCTCGACGAT CTCGTCGAGC AGGTCCGCGA GGCCACGGGG
GGCCAAGTCT CCCGGGTGGA GCTGGATCTG TCGGCGTTCA CCGGTCCGAC GGAAGGCCGG
GACTGGGCGC CCGAGGACGT CCCGTCGACC TACATGGTCC AGACCCAACC CGTGATGCTC
GACGGGGGCC GCACGGACCC CACGGACGAG GGTTCGATGG GCCGGTCCGA TCCGGCGGGC
CATCTCGTCG AGACGTTCGC GGAGCGGCTC GGAGCGGAAG CCGGGGGGAC GACCACCGCT
CCGGAGGGTG CGAAGGTCCT GGGGGAGGTG TGGTCCCCGC CGGTGGACGA ACTGGTGCGG
GTCGCGCTGG TGGAGTCCGA CAACCTGGTG TCCGAGGTGT TGGCCCGCCA GGTCGCCATC
GCCGAGGGCA AGCAGCCTTC CTTCGAGGGG GCGGCCGAGG CGACGTTGGA GGTGCTGTCG
CGGCACGGAG TCGATGTCAC CGGGGTCGAG CTCAACGACG GCAGCGGGCT CTCACCTTCG
AACAGGATCC CGCCGGCCAC GCTCACCCAG CTGTTGGCGA TGGCGGCGTC GCCGGACACC
GACAACGAGG TGACGGTGAA ACTGCGGCCG TTGCTCGACG GACTGCCGGT GGCCGGTGGC
AGCGGCACGT TGTCCACGCG TTACGACCAG GGTCCGGCCA CGCAGGGCCG CGGTTGGGTG
CGGGCCAAAA CGGGGACCAT CCCGGTGGAA CGGGTGCACA CGCTCGCCGG GGTGGTACTG
ACGGAGGACG ACAGGGTTCT GGTGTTCGCC CTCATGTCCA ACGGTGGCGA TTCGGGTGCG
CCGGCGGCGC TGGACAGGAT CTCGGCGCGA TTGCGTGGCT GTGGTTGCCG CTGA
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| Protein sequence | MRIEPRSGGT GEQQAVVAQA ETETPEQPSP PVEGPPPGES PPGATPPPEE GEAAPRPRRR
PVVVAAVFVV VLLVAGGVLA VPYVSNRLGL PWAPNAPKAD PPAPREITLA LQVPPESAPT
PTPAGVGAAI DDLVTDPALG TLLGSVVDPA TGTTLWERNA DQALAPASTT KLLTSAAALL
VLDHDMRFPT KVVAGAEPGT VVLVGGGDVT LSSLPEGEES IFPGAAHLDD LVEQVREATG
GQVSRVELDL SAFTGPTEGR DWAPEDVPST YMVQTQPVML DGGRTDPTDE GSMGRSDPAG
HLVETFAERL GAEAGGTTTA PEGAKVLGEV WSPPVDELVR VALVESDNLV SEVLARQVAI
AEGKQPSFEG AAEATLEVLS RHGVDVTGVE LNDGSGLSPS NRIPPATLTQ LLAMAASPDT
DNEVTVKLRP LLDGLPVAGG SGTLSTRYDQ GPATQGRGWV RAKTGTIPVE RVHTLAGVVL
TEDDRVLVFA LMSNGGDSGA PAALDRISAR LRGCGCR
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