Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_35640 |
Symbol | |
ID | 8388885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3881373 |
End bp | 3882041 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977579 |
Product | GTP cyclohydrolase I |
Protein accession | YP_003135347 |
Protein GI | 257057515 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0302] GTP cyclohydrolase I |
TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.289677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGGG AGGGCAGTGA CGTGACAACC AACGGCTCCT CTCCGCTCGA GGTCGATCCG TTCGAGGTCG ACGCGGAACG CCCCGAGGCC GGTCACGCCG TCTTCGACCA GGAAAGGGCT GAACGCGCTG TCCGGGAATT CCTCCTCGCC TGCGGGGAGG ATCCCGACCG CGACGGCCTG AGGGAAACAC CGGCCCGGGT CGCACGTGCC TACCGGGAGC TGTTCGCCGG GCTGTACTGC GACCCGGACC ACGTGCTGGA CCGGACGTTC GATGAGAGTC ACGAGGAGCT CGTCCTCGTG ACGGACATCC CGATCTTCAG TCTCTGCGAG CACCACCTGT TGCCTTTCCA CGGCGTGGCC CACGTGGGGT ACATCCCGAA CGGGCAGGGC AAGGTGACGG GTTTGTCGAA GCTCGCGCGC CTGGTCGACA TGTACGCGAA GCGGCCGCAG GTCCAGGAGC GGCTCACCTC CCAGGTGGCC GACGCGTTGA ACCGCAAGCT CCGCCCGCGG GGCGTGATCG TGGTCGTGGA GGCGGAGCAT CTGTGCATGT CGATGCGCGG TGTCCGCAAG CCCGGCTCCC GCACGACCAC GTCGGCGGTG CGGGGCCTGT TGCAGTCGTC GGCATCGTCG CGGGCCGAGG CGCTGGAACT CATCAAAGGT CGGCGATGA
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Protein sequence | MIGEGSDVTT NGSSPLEVDP FEVDAERPEA GHAVFDQERA ERAVREFLLA CGEDPDRDGL RETPARVARA YRELFAGLYC DPDHVLDRTF DESHEELVLV TDIPIFSLCE HHLLPFHGVA HVGYIPNGQG KVTGLSKLAR LVDMYAKRPQ VQERLTSQVA DALNRKLRPR GVIVVVEAEH LCMSMRGVRK PGSRTTTSAV RGLLQSSASS RAEALELIKG RR
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