| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35400 |
|---|
| Symbol | |
|---|
| ID | 8388861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3855705 |
|---|
| End bp | 3856526 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977557 |
|---|
| Product | NAD-dependent protein deacetylase, SIR2 family |
|---|
| Protein accession | YP_003135325 |
|---|
| Protein GI | 257057493 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACG ATTACCTCCG AGCGGCCGAG CTGATCTCTT CGGCCGATGC GCTTCTGGTG
TGTGCGGGCG CGGGGATGGG CGTCGATTCG GGACTTCCCG ACTTCCGCGG GGACGAGGGG
TTCTGGCGCG CCTATCCCCC GTACGCCAGG CTGGGATTGC GGTTCGTCGA ACTCGCCGAT
CCCGAGCATT TCGCCGAGGA CCCCGAACTG GCGTGGGGGT TCTACGGCCA CCGACTGAAC
CTCTACCGCG AGACGGAACC GCACAAGGGC TTCGCGATCC TGCGGCAGTG GGGCGCGGCC
AAGCCCGGCG GGGTCCACGT GTTCACCTCC AATGTCGACG GCCAGTTCCA GCGCGCCGGG
TTCGAGGACG TGGCGGAGGT GCACGGCTCC ATCCACCACC TCCAGTGCCT GGCCCACTGT
GGCATGGGGA TCTGGCCCGC CGACGACGTC ACGGTGGAGG TGGACCACGA GACCATGCGG
GCCCGGCCGC CGCTGCCGTC GTGTCCGCAC TGCGGAAGTC TCGCCCGCCC CAACATCCTC
ATGTTCGGTG ATTGGGACTG GCTCGGCGAC CGTTCGCAGG CCCAGCTCGA CGCGTTCACC
GAGTGGCGGC GGGCCAATCC GTCGCTGGTC GTCGTGGAGA TCGGGGCCGG GTTGGCCGTA
CCCACGGTGC GCAGACAGGC GGAGTTGGCG AGCGCGGCCA ACGGTGCGCT GATACGCATC
AACCCGCGGG AGCCGGAGAT CCGACACGGG CGTGGGGTGT CCCTGCCCGT CGGGGCGTTG
GAGGCACTCA CCACGCTCGA CTCGCTGTTG GCCGGCGACT GA
|
|---|
| Protein sequence | MRDDYLRAAE LISSADALLV CAGAGMGVDS GLPDFRGDEG FWRAYPPYAR LGLRFVELAD
PEHFAEDPEL AWGFYGHRLN LYRETEPHKG FAILRQWGAA KPGGVHVFTS NVDGQFQRAG
FEDVAEVHGS IHHLQCLAHC GMGIWPADDV TVEVDHETMR ARPPLPSCPH CGSLARPNIL
MFGDWDWLGD RSQAQLDAFT EWRRANPSLV VVEIGAGLAV PTVRRQAELA SAANGALIRI
NPREPEIRHG RGVSLPVGAL EALTTLDSLL AGD
|
|---|
| |