Gene Svir_35340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_35340 
Symbol 
ID8388855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3849689 
End bp3850624 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID644977551 
Productnegative regulator of beta-lactamase expression 
Protein accessionYP_003135319 
Protein GI257057487 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGA AACGCTCCAT CGACCGTCGC ACACTGCTAC TCCGCTCAGG TCTCGCCGTC 
ACAGCCATGG GCACCGCCCT GGCAGCGGTA CCCGCACAGG CCTCCGCCAC CGACAGCCGT
CGAGTGGAGG CTCCACACAT CTACGACACG GGCAACTGGC AGGCCCGGCC GCCACGCGAG
CCCATCACCC TGCTCAACCA CCCGCCCACC TACATCGTCG TGCACCACAC GGTGGAGCCG
GGTAACACCG ACGACTACTC ACTCGACCGT GCGTTCGCGA TCTCCCGCAG CATCCAGAAC
TTCCACATGG ACTCGAACGG GTGGATCGAC ACCGGACAAC AGTTCACGAT CAGCCGTGGC
GGCTACATCA CCGAAGGCCG ACACCGGAGT CTCGAAGCCC TCACGGGCGG CACCCAGCAT
GTCCTGGGCG CCAACGTCGC CAACCACAAC AGCGAGGTCA TCGGCATCGA GAACGAGGGC
CTCTACATGG AGGTCGACGT CCCGCAGACC CTGTGGGACT CGCTCGTCTC GCTCGTGGCG
TACATAGCGT CGCAGTACAA CATCAGCCCC GAGATGATTC GCGGGCATCG GGACTTCAAC
TCCACCGCAT GTCCCGGCGA CGTGTTGTAC GCGCGCCTGC CGGAACTGCG GCAGGCCGTG
GCCGACCGGC TCGGCGTGTC CTTCCGCGAA CCCGGTTCGA CGCCCCTGCT GCGGCCCGGC
GACAGGAGTG AAGACGTGCT GCTGGCGCAG CGTCGGCTGC GGGCGCACGG CTACGACGTG
CCCGCCCACG GCGTGTTCGA CCAAGCCACC CGGGAAGCGG TGGCGGCGTT CGCCGCGAGC
AACGGATTGG CGCAGCCCAC CTGCCAGGCC TGCGCCCACA CCGAGGAACG CGGCTATCTC
GGCCGCGACG TGTGGGAATT GCTGACCCCA CGGTAA
 
Protein sequence
MPGKRSIDRR TLLLRSGLAV TAMGTALAAV PAQASATDSR RVEAPHIYDT GNWQARPPRE 
PITLLNHPPT YIVVHHTVEP GNTDDYSLDR AFAISRSIQN FHMDSNGWID TGQQFTISRG
GYITEGRHRS LEALTGGTQH VLGANVANHN SEVIGIENEG LYMEVDVPQT LWDSLVSLVA
YIASQYNISP EMIRGHRDFN STACPGDVLY ARLPELRQAV ADRLGVSFRE PGSTPLLRPG
DRSEDVLLAQ RRLRAHGYDV PAHGVFDQAT REAVAAFAAS NGLAQPTCQA CAHTEERGYL
GRDVWELLTP R