| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35280 |
|---|
| Symbol | |
|---|
| ID | 8388849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3844192 |
|---|
| End bp | 3845088 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977545 |
|---|
| Product | ABC-type Mn2+/Zn2+ transport system, permease component |
|---|
| Protein accession | YP_003135313 |
|---|
| Protein GI | 257057481 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.74517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.501768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGT TGTTCGACTT CGACCTGACG CTGGAACTGC TCGGATTCGA CTTCGTGCAG
ACGGCCTTGC TCGCCGCGGC CGTACTCGGG CTGGTGGCGG GCACGTTGGG GCCACTCATC
GTCATGCGCC GGATGTCGTT CGCCGTGCAC GGTACGGCGG AGTTGGCGTT CACCGGAGCC
GCCGCCGCGC TGCTGTTGGG CATCGGGGTG AGCTACGGCG CGCTGGCGGG CGCGGTGATC
GCCGCGCTGT TGCTCGGTCT GCTCGGAGGG CGTGAGTCCG ATCGCGACTC GGTGATCGGT
GTGATCCTCG CGTTCGGACT GGGACTCGGT GTGTTGCTGC TGTGGTACTA CCCGGGCCGG
GCGTCCAACA AATTCGGCAT CCTGGTGGGG CAGATCGTGG CCATCGAACC CACCGACCTG
ACCACGTTGG TGATCGCGGC CGGTGTCGTG CTCGCGGTGC TCGCGATCAT CTACCGGCCG
TTGTTGTTCT CCAGTGTGGA TCCTGTGGTC GCGGCGGCGC GTGGGGTCCC GGGGCGACTG
TTGGCACCGC TGTTCGCGGT ACTCATCGGG GTCGCCACCG CGCTCGGGGT GCAGATCGTC
GGCGCGTTGT TGGTGGTGGC GTTGATGGTG ACGCCCGCCG CTGCCGCCGC CCGGGTGACG
GCGAGTCCGC TGCGCGCCAC GATCCTGTCC GTGATCTTCG CCGAGTTGGC CGCGCTCGGC
GGCATCGTGC TGTCACTCGC CCCGGGCGCG CCTGTGAGCT TCTTCGTCAC CGCCGTCTCG
TTCACGATCT ACCTCGTGTG TCGGGTGGTG GAGTGGTGGC GCAACAGGGC GGCCAGGGTG
AGCACGAACG ACGCCGACGA CGGTGGAGCA CGACGCGAGC CGGTCGGCGC GGCGTGA
|
|---|
| Protein sequence | MNRLFDFDLT LELLGFDFVQ TALLAAAVLG LVAGTLGPLI VMRRMSFAVH GTAELAFTGA
AAALLLGIGV SYGALAGAVI AALLLGLLGG RESDRDSVIG VILAFGLGLG VLLLWYYPGR
ASNKFGILVG QIVAIEPTDL TTLVIAAGVV LAVLAIIYRP LLFSSVDPVV AAARGVPGRL
LAPLFAVLIG VATALGVQIV GALLVVALMV TPAAAAARVT ASPLRATILS VIFAELAALG
GIVLSLAPGA PVSFFVTAVS FTIYLVCRVV EWWRNRAARV STNDADDGGA RREPVGAA
|
|---|
| |