| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35220 |
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| Symbol | |
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| ID | 8388843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3835287 |
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| End bp | 3838169 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644977539 |
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| Product | DNA/RNA helicase, superfamily II, SNF2 family |
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| Protein accession | YP_003135307 |
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| Protein GI | 257057475 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.608461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTCAC AGCACGACGT TTCACGCACG GTCTCCGCGT CTGGCTCCGC GCACGTAGCG
GAACTCTTCC GGGATTCGGA GAAGAACGAG GTCGATATAG CTGCCGGTTC CCAAATCATC
GTCCGTGATG AGGAATGGTT GGTGCGCTCG GTTCGCCGCA CTGCACGCGG GGAGTTGCGT
GTGGAGGCCA CGGGGGCATC AGAGCTGGTG CGTGACCAGG ACGCGGTCTT CTACAGCTCG
CTGGATGCCA TCGAAGTGCT GGATCCTCGG CATACCAAGT TGATTGCGGA CGAGAGTCCG
GGCTTTCGAA GTTCGCGGCT ATGGCTGGAG TCGCTGTTGC GGCAGAGCCC GACCCCGATC
ACCGACACCC GTATCGTGGC GGGTCACCAC GGCTTAGCCG ACTCGATGGA GTACCAGCTT
CGTCCTGCGT ATCAGGCATT GTCGAACCTG CGCCCGCGTA TCTTGATCGG CGATGCTGTG
GGCCTGGGCA AGACGCTGGA GATCGGCATA CTGCTCACCG AACTCATCAA GCGGGGACGA
GGGGATCGCA TTCTCGTCGT AACACCTCGT GCGGTGCTGG AACAGTTTCA GCGCGAGATG
TGGACGCGAT ACTCGATTCC GCTGGTGCGG CTCGACTCCG ACGGCATCCA AAAGGTACGT
CAGACGCTGC CTGCCACCCG CAATCCTTTC AGCTACTACA AACGCGTGAT CGTCTCGATC
GACACGTTGA AGAACCCGGC TCGGTATCGA CACCATCTGT CGGGCCATCG CTGGGACGTC
GTGGTGATCG ACGAATGCCA CAACCTCATC AACAAGGGCA CCCAGAACAA CGAGTTGGCC
CGGCTGCTGG CTCGCCAGAC CGATGCCCTC ATCCTGGCCA GCGCTACTCC GCACAACGGC
AAGCGGGAGT CGTTCGCCGA GCTGATTGGC CTGCTGGACC CTGCGGCGAT CGCCGATCCG
AAGGACTACC AGGCCTCGGA CATCGAGCAC CTCTATGTAC GCAGGCACCG CAATTCCCCC
GACGTGAAAC TCGAGGTCGG GCACCGTTGG GCGCCTCGGC GTGATCCGGA GATCATCCCG
GTGGAGCCGA CGCCCGAGGA ACAAGCCGTG CTGGAGGAAC TCACCTACGC CTGGCTCCGC
CCGGCTTCCG GGCAGGCTCC GGTGTCGGGC CGGGGCAAGA CACTGTTTCC CTGGACTCTG
TTCAAGGCCT TCCTCTCTTC GCCTCGGGCG CTGCGGGAGA GCATCCGCCG CAGGTTGAAG
ACCCTGAGCA CCCAGGACGA TGGCTCAGCC GAAGTGGAGG CGCTGCGCCG GCTCGACGGG
CTCGCCGAGG TAGCGGAGCG ACGGGGCGCT GCGAAATTCG ATGCCCTGCT GAAGCACCTC
GCCGACATCG GGGTGGGCAA GGGGAGCGAC ACGAGAGTCG TGGTGTTCTC CGAGCGTATC
CAGACTCTGG AGTGGTTGCG TGATGAGCTG CGCCGCAAAC TCCGGCTGCC CGACAAGGCC
GTCCAACTAC TCCACGCACA GCTCAACGAC AGAGACGTGC AGCAGGTGGT GGAGGACTTC
GCGCTGGAGG CCAGCCCGCT GCGGATTCTG TTGGCCAGCG ACATGGCTTC CGAGGGTCTG
AACCTGCACC GTCAGTGCCA CCAGTTGGTG CACTACGACC TGCCGTGGAG CTTCATTCGG
ATCCAGCAGC GCAACGGTCG TATCGACCGC TACCTGCAGG AACACGAGCC GCGTATCACG
GCGCTCGCCT TGACCTCGTC CGACACGGAC ACGGTCAGTG ATCTGCGGGT GGTGACCAAA
CTGCTGGAGA AGGAACACGC CGCCAATCAG GCGCTGGGGG ATGCCGGGGC GCTGCTCGAC
GTCCGTGATG CGGACCTTGA AGAGGACCGG ATCATGGAGC TTCTCCGGCA GGGCAAGGAC
CTCGCTACCG AGATCAACGA TCCGGAGGAG GTGAACCCGT TCGCCGCCCT GATCGCCACG
GGTGGTGAGC ACGCCGATGA TCCGCCGGTG CCGACAGCGC CTCGCAGCAC CCTGTTCGAC
GACGACGACA ACTTCCTCAC CGAGGCGCTG CACGAGATCA CGGATAACCC GGGGGCGCTG
GACATCCATC GCGACGAGGA CACGGACCTG CTGGCGTTCA ACACGCCTGC GGACCTGGCC
GAACGGCTGA AGGACCTGCC GGACAGCTAC CTGCGTGACA GGGAGGTGTC GAGCCGGATC
CGGGTGTCGG CCCAGCGCCG GTTCTCCGAG CAGAGGTTGG CCAAGGCCCG TGTGGAAGGA
AAGACTCTGT GGCCGGACGT CAGCTATTTG GCGCCGAGCC ACCCCGTGTT GGAGTGGGCG
ACGAGCAGAG CACTCGCCAG GTTCGGGCGT AACCAGGCCC CGGTGATGGC CGCCCCGGTG
CCGGAGCCGG TGTTTTTGAC CCAGGCGACG TGGGCGAATT CCCTCGGGCA ACCGGTGCTG
ACTCGTTGGG GCGCGATCAC TGGGTTGCCG GATGAACCCA AGGTCGGGGA TCTGCGGGAA
GCTCTGGAAC GGGCCGGTTT GAAGGAACAC GCTCGCAACC CCGGTGGGGT GGCCGGCTGG
ATTGAGCGAC TGCAGTCTTT CGTCCCCGCC GCGGTGGAGG CTGCGACGGA GGACTTGCGT
CGCCATCGCG ATGAGGTCGA GGGAGATCTG CTGGAACGCC TCGACGAACA TCGCAAGCGG
TTGTCGCGGT GGGAACAACG GGCGCTGTTC GTGGTGGAAC AGGCGGGCGG TTCCGCCAGA
AGCAAGGACG CTGTCGCCAG TACTCGTGAC GAGATTTCCG AGCTCATCGA TTCATTGGCT
GCCGCGGGAG AGCCGTTCGT GCGCGTGGTG GGGCTGATCG TCCCCGATCG CAGGACGGTG
TGA
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| Protein sequence | MSSQHDVSRT VSASGSAHVA ELFRDSEKNE VDIAAGSQII VRDEEWLVRS VRRTARGELR
VEATGASELV RDQDAVFYSS LDAIEVLDPR HTKLIADESP GFRSSRLWLE SLLRQSPTPI
TDTRIVAGHH GLADSMEYQL RPAYQALSNL RPRILIGDAV GLGKTLEIGI LLTELIKRGR
GDRILVVTPR AVLEQFQREM WTRYSIPLVR LDSDGIQKVR QTLPATRNPF SYYKRVIVSI
DTLKNPARYR HHLSGHRWDV VVIDECHNLI NKGTQNNELA RLLARQTDAL ILASATPHNG
KRESFAELIG LLDPAAIADP KDYQASDIEH LYVRRHRNSP DVKLEVGHRW APRRDPEIIP
VEPTPEEQAV LEELTYAWLR PASGQAPVSG RGKTLFPWTL FKAFLSSPRA LRESIRRRLK
TLSTQDDGSA EVEALRRLDG LAEVAERRGA AKFDALLKHL ADIGVGKGSD TRVVVFSERI
QTLEWLRDEL RRKLRLPDKA VQLLHAQLND RDVQQVVEDF ALEASPLRIL LASDMASEGL
NLHRQCHQLV HYDLPWSFIR IQQRNGRIDR YLQEHEPRIT ALALTSSDTD TVSDLRVVTK
LLEKEHAANQ ALGDAGALLD VRDADLEEDR IMELLRQGKD LATEINDPEE VNPFAALIAT
GGEHADDPPV PTAPRSTLFD DDDNFLTEAL HEITDNPGAL DIHRDEDTDL LAFNTPADLA
ERLKDLPDSY LRDREVSSRI RVSAQRRFSE QRLAKARVEG KTLWPDVSYL APSHPVLEWA
TSRALARFGR NQAPVMAAPV PEPVFLTQAT WANSLGQPVL TRWGAITGLP DEPKVGDLRE
ALERAGLKEH ARNPGGVAGW IERLQSFVPA AVEAATEDLR RHRDEVEGDL LERLDEHRKR
LSRWEQRALF VVEQAGGSAR SKDAVASTRD EISELIDSLA AAGEPFVRVV GLIVPDRRTV
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