| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35060 |
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| Symbol | |
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| ID | 8388828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3808615 |
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| End bp | 3811149 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977526 |
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| Product | trehalose 6-phosphatase |
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| Protein accession | YP_003135294 |
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| Protein GI | 257057462 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.746667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGACCG CCGAGGCCTT ACCTGCTGAG CTGCGGCGTG CGATCGTGCA GATCGCCAGG
ACGCCGCGCC TGCTGGTCGC CTGTGACTAC GACGGGACGC TGGCGCCCAT CACCACGAAC
CCCGACGAGG CCAGACCCCG CCCCGAATCG GTAGGCGCTC TGCGGTCCCT AGCGTCGCTA
CATGAGACGA CGTGTGCGGT GATCTCCGGC CGGGCGTTGC GTGACCTGGC GATCCTGTCC
CGCCTCCCCG CGGAGATCCA CCTCGTCGGC AGCCACGGCT CGGAGTTCGA CATCGGCTTC
GTCCACGCCC TCGACCCCGA GGCCCGGGAA CTGCACCGGA GGTTGGAAGC CGAGCTGGCA
CGCATCATCG ACGGGGTCCC CGGGGCCTCG TTGGAGGTCA AGCCGGCGAG TGTCGCCGTG
CACGTACGTC GCGCCGAACG GGACGCGGCC GCCCGCGTGG TGGCCGCCGT GCACGAAGGC
CCGTCCACTT GGGAAGGCGT GACCACCACG GACGGCAAGG AAGTCGTCGA ACTCGCGGTG
GTGCGCACCG ACAAGGGCAG TGCGCTCGAC ACCCTGCGCC ACCAAGTGGG AGCGACCGCC
GCCATATTCG TCGGTGACGA CGTCACCGAC GAGAAGGCGT TCGCGCGGCT ACAGGGACCC
GACCTGTCCG TGAAGGTCGG CGAAGGGGAA ACCCTGGCGC AATACCGGGT CGAGGACACC
GAGGACGTCG CCACGGTACT CGCCTTCCTG TTGGAGGAGC GGCGCAATTG GCTGTACGGC
GAGCAGTCCC CGCCGATCGA ACGCCTGACG ATGCTCGCCA ACGAGCGGTC GGTCGCGCTC
CTCACCCCGG ACGCCAAGCT GACGTGGCTG TGCCACCCGG GCCCCGATGC CCCGGCCGTG
TTCGCCGACC TGCTCGGCGG GGAGAGCGCG GGGCATTTCT CCATCAGGCC GCACCGCAAC
GGGCTGCCGC TCGGTCAGCG TTATCTGCCC AACACGATGA CGGTGGAGAC GCGGTGGTCC
CGGCTGCTCG TCACCGACTA TCTGGAACCC GAAAGCCCAC CGCATCGCAC CGATCTGGTG
CGTGTCATCA GCGGTGAGGC CGCCGCGTCG GTCGTGTTCG CGCCGAGGCC CGAGTTCGGC
GGTGTGCCCG TGCGACTGCT GCCCGAGGAG GACGGCCTGC GCGTACTCGG TACGTCCGAA
CCGTTCGTGC TGCGCTCCCC CGGCGTGCAG TGGGAGATCA CCAACGACGG CCTGCACGAC
ACGGCCCGGG CACTGGTGCA GCCCGAACCC GACAAGCCCG TGGTGTTGGA GTTGCGCTGT
GGCACCACCG ATCTGAGCCC GCACGAACTG CCCGAGGTCG ACCGCAGGGC GAGGGCAGGC
CGCTACTGGA GCGACTGGGC GACCACCCTG AAGCTCCCGC AGGTCGAGCC CGAACTCGTC
GCCAGGTCCG CGTTGACGCT TCGCGGCCTG ACCGACGCCG ACACCGGTGG TGTGTTGGCG
GCGGCCACCA CGTCCCTGCC CGAGGAGATC GGCGGTGTCC GTAACTGGGA CTACCGCTAC
TGCTGGGTCC GCGACGGCGC CATGACGGTG CGTGAGCTGG TGGCGCTGGG CTCGTTGGAG
GAGGCCGAAG GCTTCCTGCG CTGGCTGCAC GGCGTGCTGT CCACGCTCGC CGGCCCGGAG
CGGTTGCACC CGCTGTACAC ACTCGCCGGC ACGCAGATCG GCGCCGAGGC CGTGATCGAC
TCGCTGCCCG GATACAAGGG TTCGCGGCCC GTGCGGGTCG GTAACCTCGC CAACCACCAG
GTGCAGCTCG ACGTGTTCGG CCCCGTCGTC GAGCTCGTGG TGGCACTGGC CGAGGCCCGG
GGCGAGCTGC GGGACGAGGA CTGGCAGCTG GTGCGGGCCA TGGCCGAGGC CGTCACCCGC
CGGTGGTTCG AACCCGACCA CGGCATCTGG GAGGAACGGC ACGTGCCGCG TCACCGCGTG
TACTCGCGGG TGATGTGCTG GGTGACCATC GACAGGGCGA TCAAGCTGGC CGAGATCTAC
GACCGTCCCA TCCCGAACGG ATGGCCAAAG CTGCGCGATC AGATCGCCGC CGACGTGCTG
GAGAACGGCT GGAACCCGGA GGTGCAGGCG TTCACCACCG CCTACGACGG CACCGACCTC
GACGCCGCTT CGCTGTTCGT GGGCCTGTCG GGCCTGTTGG ACCCACAGGA CGAGCGCTTC
CAGTCGACGG TGACGGCCAT CGAGTCGGAG CTGCGCAGCG GTTCCACGGT GTACCGGTAT
CGGCGGGACG ACGGCCTTCC GGGCAACGAG GGCGGTTTCC ACCTGTGCGC CGCGTGGATG
ATCGAGGCGT ACCTGCTCAC CGGGAGGCGG ACCGAGGCCC AGGAGCTGTT CGACCAGCTC
GTGGACGCGG CCGGGCCGAC CGGATTGTTG CCCGAGCAGT ACGACCCGGT GGCCGAGCGT
TCCCTGGGTA ACCATCCCCA GGCGTACTCC CACCTCGGTC TGATCCGCTG CGCCCGACTG
CTGTCGGAGC TGTAA
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| Protein sequence | MLTAEALPAE LRRAIVQIAR TPRLLVACDY DGTLAPITTN PDEARPRPES VGALRSLASL
HETTCAVISG RALRDLAILS RLPAEIHLVG SHGSEFDIGF VHALDPEARE LHRRLEAELA
RIIDGVPGAS LEVKPASVAV HVRRAERDAA ARVVAAVHEG PSTWEGVTTT DGKEVVELAV
VRTDKGSALD TLRHQVGATA AIFVGDDVTD EKAFARLQGP DLSVKVGEGE TLAQYRVEDT
EDVATVLAFL LEERRNWLYG EQSPPIERLT MLANERSVAL LTPDAKLTWL CHPGPDAPAV
FADLLGGESA GHFSIRPHRN GLPLGQRYLP NTMTVETRWS RLLVTDYLEP ESPPHRTDLV
RVISGEAAAS VVFAPRPEFG GVPVRLLPEE DGLRVLGTSE PFVLRSPGVQ WEITNDGLHD
TARALVQPEP DKPVVLELRC GTTDLSPHEL PEVDRRARAG RYWSDWATTL KLPQVEPELV
ARSALTLRGL TDADTGGVLA AATTSLPEEI GGVRNWDYRY CWVRDGAMTV RELVALGSLE
EAEGFLRWLH GVLSTLAGPE RLHPLYTLAG TQIGAEAVID SLPGYKGSRP VRVGNLANHQ
VQLDVFGPVV ELVVALAEAR GELRDEDWQL VRAMAEAVTR RWFEPDHGIW EERHVPRHRV
YSRVMCWVTI DRAIKLAEIY DRPIPNGWPK LRDQIAADVL ENGWNPEVQA FTTAYDGTDL
DAASLFVGLS GLLDPQDERF QSTVTAIESE LRSGSTVYRY RRDDGLPGNE GGFHLCAAWM
IEAYLLTGRR TEAQELFDQL VDAAGPTGLL PEQYDPVAER SLGNHPQAYS HLGLIRCARL
LSEL
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