| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35020 |
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| Symbol | |
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| ID | 8388824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3803690 |
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| End bp | 3805003 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977522 |
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| Product | serine phosphatase RsbU, regulator of sigma subunit |
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| Protein accession | YP_003135291 |
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| Protein GI | 257057459 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGTGG CATTCGACCG AGCCCACCGT GGGTATCCGG ACCGCCCCAT CGCTGGAGCG
CCGCAAGGGG GCGACTGGGC GCACGTCCGC TTCATCCACG ACCTGTCCCG CCAACTCGCC
GGATCGCTGA ACGTACGACG CACCGTATTC CGCGCGCTGG ATTTCGCCGT TCCGTATCTC
GGTGCCTGGG GGATGCTCGC GTTTTTCGAC GCCGACTCCG TTTCGGTGTA CTCGCACGAG
CGTGACGGTC GGGTCTCGGG GCCGACGTCC CTGGGGCGTC TCGACCCCGC TCACGGCCTG
GGACGCTTCC GGCGGCGAGG ACACACCGAA CGATACACGT CTCCTCCGGA CGACGTCGAG
GCCGTGTTGG AGGAGTTGCT CCCGTCCGAC TCGTTGCGGA AGGCCGCCGC GGCGCACCGG
CCGACGTCAG CACTGGGAGT GGCCCTCAAC ATCGGAGGCG CGACCAACGG GGTACTCGTG
GTGATCCGGG ACGGTGGCCG CGGCTACACG GACAGTGACG TGGTCGCCGC CGAGGAGTTC
GCGCTCCGGG TGGCCGCCAC TCTCGAATCG GCCAGGCTGT ATGAGGAACG CGGACAACTG
ACGGAGGCGA TGGAGGAGTC GCTTCGGCCA CCGGAGTTGC CCGAGTACCC GGGAGTGCGC
ATAGCCGCGC GGTACCGGCC AGGGGCGCAG CGGCTGCGCA TCGGGGGCGA TTTCTATGAC
GTGCACGGCG ATGCCGACGA CTTCACCGTC GTGATCGGCG ACGTCTGCGG CAAGGGTATC
GACGCCGCCA TGTTCACCGG GCTCGCGCGT CAGACGATCA GGACGGCGGC GTTCTTCGAC
CGATCGCCCG CCGCGGTGTT GAAAGCGATG AACGAGGTGT TGCGCGCACA GCTCGTCCAC
CGGTTCATCA CGGTGGCGTG TGTGCGGTTC CACCGCTCCG CCGGACAGGA CGAACTGACG
GCGACCATGG CGGTGGCGGG ACACCCGGCG CCGTTGGTGT TACGCGCCGA CGGCGCCGTG
GAGGAGCCGA CGGTCACCGG AACGGTCGCG GGCATCATCG CCGGACTGTC GTTCACCGAA
ACCGAGGTGC AGCTTAGGGA CGGCGACACC GTTCTCCTCT ACACGGACGG GGTCGACGAG
GCCCGCGGTC GCGAGGGGTT CTTCGGTCAC GAACGGTTGC GCGTCCTGTT GCCGGAGTAC
GCGCGAGCCG GGCCCGCCAC CTTGTGCGAG GCCGTGGAAC AGCGCGTACT CGAACACCTC
GACGGTGCCG CGCACGACGA CATCGCTCTC ATCGCTGTGC AGAACGGGAC GTGA
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| Protein sequence | MNVAFDRAHR GYPDRPIAGA PQGGDWAHVR FIHDLSRQLA GSLNVRRTVF RALDFAVPYL
GAWGMLAFFD ADSVSVYSHE RDGRVSGPTS LGRLDPAHGL GRFRRRGHTE RYTSPPDDVE
AVLEELLPSD SLRKAAAAHR PTSALGVALN IGGATNGVLV VIRDGGRGYT DSDVVAAEEF
ALRVAATLES ARLYEERGQL TEAMEESLRP PELPEYPGVR IAARYRPGAQ RLRIGGDFYD
VHGDADDFTV VIGDVCGKGI DAAMFTGLAR QTIRTAAFFD RSPAAVLKAM NEVLRAQLVH
RFITVACVRF HRSAGQDELT ATMAVAGHPA PLVLRADGAV EEPTVTGTVA GIIAGLSFTE
TEVQLRDGDT VLLYTDGVDE ARGREGFFGH ERLRVLLPEY ARAGPATLCE AVEQRVLEHL
DGAAHDDIAL IAVQNGT
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