Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_35020 |
Symbol | |
ID | 8388824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3803690 |
End bp | 3805003 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977522 |
Product | serine phosphatase RsbU, regulator of sigma subunit |
Protein accession | YP_003135291 |
Protein GI | 257057459 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTGG CATTCGACCG AGCCCACCGT GGGTATCCGG ACCGCCCCAT CGCTGGAGCG CCGCAAGGGG GCGACTGGGC GCACGTCCGC TTCATCCACG ACCTGTCCCG CCAACTCGCC GGATCGCTGA ACGTACGACG CACCGTATTC CGCGCGCTGG ATTTCGCCGT TCCGTATCTC GGTGCCTGGG GGATGCTCGC GTTTTTCGAC GCCGACTCCG TTTCGGTGTA CTCGCACGAG CGTGACGGTC GGGTCTCGGG GCCGACGTCC CTGGGGCGTC TCGACCCCGC TCACGGCCTG GGACGCTTCC GGCGGCGAGG ACACACCGAA CGATACACGT CTCCTCCGGA CGACGTCGAG GCCGTGTTGG AGGAGTTGCT CCCGTCCGAC TCGTTGCGGA AGGCCGCCGC GGCGCACCGG CCGACGTCAG CACTGGGAGT GGCCCTCAAC ATCGGAGGCG CGACCAACGG GGTACTCGTG GTGATCCGGG ACGGTGGCCG CGGCTACACG GACAGTGACG TGGTCGCCGC CGAGGAGTTC GCGCTCCGGG TGGCCGCCAC TCTCGAATCG GCCAGGCTGT ATGAGGAACG CGGACAACTG ACGGAGGCGA TGGAGGAGTC GCTTCGGCCA CCGGAGTTGC CCGAGTACCC GGGAGTGCGC ATAGCCGCGC GGTACCGGCC AGGGGCGCAG CGGCTGCGCA TCGGGGGCGA TTTCTATGAC GTGCACGGCG ATGCCGACGA CTTCACCGTC GTGATCGGCG ACGTCTGCGG CAAGGGTATC GACGCCGCCA TGTTCACCGG GCTCGCGCGT CAGACGATCA GGACGGCGGC GTTCTTCGAC CGATCGCCCG CCGCGGTGTT GAAAGCGATG AACGAGGTGT TGCGCGCACA GCTCGTCCAC CGGTTCATCA CGGTGGCGTG TGTGCGGTTC CACCGCTCCG CCGGACAGGA CGAACTGACG GCGACCATGG CGGTGGCGGG ACACCCGGCG CCGTTGGTGT TACGCGCCGA CGGCGCCGTG GAGGAGCCGA CGGTCACCGG AACGGTCGCG GGCATCATCG CCGGACTGTC GTTCACCGAA ACCGAGGTGC AGCTTAGGGA CGGCGACACC GTTCTCCTCT ACACGGACGG GGTCGACGAG GCCCGCGGTC GCGAGGGGTT CTTCGGTCAC GAACGGTTGC GCGTCCTGTT GCCGGAGTAC GCGCGAGCCG GGCCCGCCAC CTTGTGCGAG GCCGTGGAAC AGCGCGTACT CGAACACCTC GACGGTGCCG CGCACGACGA CATCGCTCTC ATCGCTGTGC AGAACGGGAC GTGA
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Protein sequence | MNVAFDRAHR GYPDRPIAGA PQGGDWAHVR FIHDLSRQLA GSLNVRRTVF RALDFAVPYL GAWGMLAFFD ADSVSVYSHE RDGRVSGPTS LGRLDPAHGL GRFRRRGHTE RYTSPPDDVE AVLEELLPSD SLRKAAAAHR PTSALGVALN IGGATNGVLV VIRDGGRGYT DSDVVAAEEF ALRVAATLES ARLYEERGQL TEAMEESLRP PELPEYPGVR IAARYRPGAQ RLRIGGDFYD VHGDADDFTV VIGDVCGKGI DAAMFTGLAR QTIRTAAFFD RSPAAVLKAM NEVLRAQLVH RFITVACVRF HRSAGQDELT ATMAVAGHPA PLVLRADGAV EEPTVTGTVA GIIAGLSFTE TEVQLRDGDT VLLYTDGVDE ARGREGFFGH ERLRVLLPEY ARAGPATLCE AVEQRVLEHL DGAAHDDIAL IAVQNGT
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