| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34970 |
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| Symbol | |
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| ID | 8388819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3798332 |
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| End bp | 3799957 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977517 |
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| Product | predicted TIM-barrel fold metal-dependent hydrolase |
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| Protein accession | YP_003135286 |
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| Protein GI | 257057454 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.134464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.645084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACC TGCTGCTACG TGATGTGCGT GCCCTGACCA TGCGTGAAGA TCGGCCCCGG
GCCCACACCG TCGGTGTGCT GGGGGGCCAC ATCGTCGGGG TGGACGAGGA GGTCGAGGGG
GCTTCCGCCC GTAGGGTCGT CGACGGGGGC GGGGCGGTAC TCACGCCGGG CTTCGCCGAC
GCGCACAACC ACATGGTGTG GTTCGGACTG TCGCTGGCCG AGATGGACCT GTCCACGTGT
CGCACCCTCG ACGAGGTCTA CGACGCGGTG GCCGAACGTG CGGCCAGGTT GCCGTCCGAC
GCGTGGGTGA TCGGGTCGCA GTATGACGAC TTCGTGCTGG GCGGGCACCC CGACCGAGCC
GCGTTGGACC GTGCGGGTGG TGGGCGTCCG GTGTGGTTGA AGCATCGGTC GGCGCACATG
TGTGTGGTCA GCAGCGCCAT TCTGGACAAG GCCGGGATCC TCGACGATTC GGCTGTCGTG
CCCGAGGGCG GAGTCGTGGA GCGGGACGCT TCGGGGGAGC CGACGGGGCT GCTCGCGGAG
CAGGCACAGC AGCTGGTGGA CGCGCTGGTG AAGCCGTACC CGGTGGAGGA GCTCGTCGAG
GCCATCGCCC GAGCGTCCGA GGTGTACGTC GCCGAAGGAC TCACCCATGT CACCGAGGCG
GGTGTCGCCG GGGGCTGGAT CGGACACAGC CCCGCCGAGG CGGCCGCCTA TCAGCTCGCC
CGGCAACGCG GGAAGTTGAA CGTGCGCGTG GAATTGATGC CCGCCACCGA GACACTGCAT
CCGCTCACCG ACGAGTTGGT GGGTCTCGAT CTCGGCGTGC GCAGTGGCTT CGGTGACGAC
TTCCTGCGCA TCGGGCCGAT GAAGATCTTC ACCGACGGGG CGTTGAGCAG CAAGACCGCC
GCCGTCACGC AACCGTTCGA AGGCGACGGC GGTGTCGGGG TGCTGGGTGA TGACCCCGAA
GTGCTGCGGA ATCGCATCCT CGCGGCGCAT CGCGGGGGTT GGCGCGTCGC GGCGCACGCC
ATCGGTGACC GCGCCATCGA TCTCACATTG GAGGCGTTCG AGCGGGCGCA GCGGGAGTGT
CCCCGGCCCG GCGTGCGGCA TCGCATCGAG CACGCGGCCA TGGTGCGTCC CGATCACCTG
CCCCGACTGG CCGCGCTCGA CGTCGTCCCC GTGCCGCAGG CTCGATTCCT GTACGAGATC
GGTGACACCA TGCGCACGTC ACTCGGTGAG GCGAGGATTC CGTGGCTGTA CCGACACAGG
TCGTTCCTCG ACGCCGGATT GCGCGTGCCG GGCAGTTCCG ACCGGCCGTG CGTGGGTACC
GGCGCCCCAC TGGCGGGCAT GCGGAACATG GTCGAGCGCA CCACCAGCGG TGGGGTGGTG
CTCGCCGAGG ACGAGCGGGT GGATGCGATG GAGGCGCTGC GGGCCTACAC CACGCACGCC
GCGTACGCCG CGTGTCTGGA GGACCGGCGT GGGCGTATCG AGGCGGGGAT GCAAGCCGAC
CTCGTACTGC TCGGTGATGA CCCGACCACC GTCGCGCCGT CGGCCATGGA CAAGATCAGG
GTGCTCGCGA CGTTCGTCGC GGGTGAGGTG GTGCACGGCG GTGAATCCCT GACCTACGTC
CGGTGA
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| Protein sequence | MLDLLLRDVR ALTMREDRPR AHTVGVLGGH IVGVDEEVEG ASARRVVDGG GAVLTPGFAD
AHNHMVWFGL SLAEMDLSTC RTLDEVYDAV AERAARLPSD AWVIGSQYDD FVLGGHPDRA
ALDRAGGGRP VWLKHRSAHM CVVSSAILDK AGILDDSAVV PEGGVVERDA SGEPTGLLAE
QAQQLVDALV KPYPVEELVE AIARASEVYV AEGLTHVTEA GVAGGWIGHS PAEAAAYQLA
RQRGKLNVRV ELMPATETLH PLTDELVGLD LGVRSGFGDD FLRIGPMKIF TDGALSSKTA
AVTQPFEGDG GVGVLGDDPE VLRNRILAAH RGGWRVAAHA IGDRAIDLTL EAFERAQREC
PRPGVRHRIE HAAMVRPDHL PRLAALDVVP VPQARFLYEI GDTMRTSLGE ARIPWLYRHR
SFLDAGLRVP GSSDRPCVGT GAPLAGMRNM VERTTSGGVV LAEDERVDAM EALRAYTTHA
AYAACLEDRR GRIEAGMQAD LVLLGDDPTT VAPSAMDKIR VLATFVAGEV VHGGESLTYV
R
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