| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34930 |
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| Symbol | |
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| ID | 8388815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3794362 |
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| End bp | 3795273 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644977513 |
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| Product | DNA polymerase LigD, polymerase domain protein |
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| Protein accession | YP_003135282 |
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| Protein GI | 257057450 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.564701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.292075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACCA TGACACAACC AGTCGACATC GAGGGACGCC GACTCGAATT ATCCAATTTG
GACAAAATTC TCTACCCGGA ACACGGATTC ACCAAGGGCG AGCTCATCGA CTACTACGCA
CGGGTGGCTC CGGTGCTGTT ACCCCACGTG CGGGACCGTC CGCTCACCCT GAAACGCTAT
CCCGACGGGG TCGAGGGTAA GTCGTTCTTC GAGAAGAACG TCTCCACCCA CGCACCCGAC
TGGGTACGCA CCGTGCCCAT CGAGACACCG GAGAGCTCGC ACAGCCGAAA AAGCGCCGAC
TTCGCGCTCG TTCAGGACCT GTCGACCTTG GTGTGGGCCG CGAACCTCGC GAGCATCGAA
TTGCATATCC CGCAATGGAC CGTCGGGCCA CGAGGAGAAA GACGCAATCC GGACTTGCTC
GTGTTCGACC TCGATCCCGG AGCCCCCGCC ACGATCGTCG ATTGTTGCGA GGTGGCGCTG
TGGCTACGCG ACGAACTCAC CGACGACGGA CTGACCGCGT ATCCGAAAAC CAGCGGCTCG
AAAGGATTGC AACTCTACGC TCCCGTACAG ACACGTTCCG ACGACCGAAC GAACGACTAC
GCCAAGCGAG TGGCCGAGAA GCTGGAGCGT CGACATCCGC GCCGGGTCGT ATCCCGCATG
GCGAAGAAGC TGCGCGTCGG CAAAGTGCTC ATAGACTGGA GCCAGAACAA CCCCAAGAAA
ACCACCGTCG CGCCCTACTC ATTGCGCGCG AGATCGGCGC CCACCGTGTC CACACCGGTA
ACCTGGTCGG AGGTCGAAGC CTGCGAGAAC CCGGCGGAGC TCGGGTTCGT GGCCGACGAG
GTGCTGGACC GTGTCGACGA GCACGGCGAC CTGTTCGAAT CCCTTTTGAC GCGAGCCAGG
CCGTCCCTTT GA
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| Protein sequence | MTTMTQPVDI EGRRLELSNL DKILYPEHGF TKGELIDYYA RVAPVLLPHV RDRPLTLKRY
PDGVEGKSFF EKNVSTHAPD WVRTVPIETP ESSHSRKSAD FALVQDLSTL VWAANLASIE
LHIPQWTVGP RGERRNPDLL VFDLDPGAPA TIVDCCEVAL WLRDELTDDG LTAYPKTSGS
KGLQLYAPVQ TRSDDRTNDY AKRVAEKLER RHPRRVVSRM AKKLRVGKVL IDWSQNNPKK
TTVAPYSLRA RSAPTVSTPV TWSEVEACEN PAELGFVADE VLDRVDEHGD LFESLLTRAR
PSL
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